Acyl-ACP Thioesterase Fat A

Acyl-ACP Thioesterase Fat A[partical sequence]

Protein 1

Camelina Protein Sequences
>contig03899 length=1244 numreads=75 PITHKTLLIIFPKITKPILSLPRNVEAFV*CN*PLTQLFLLRFSPAFCSGASPYRTRLLFSDKEGTFTGNSLSRSRKQQPPCCRFCFRCSSGGSSPIWSVDGRWVV*GEVHC*KL*SWD*QNCHR*DNC*SLAGSGM*SCSESWIFD*WVCYNTYYEELHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDCATGEVIGRATSKWVMMNQDTRRLQRVTDEVRDEYLVFCPREPRLAFPEENNSSLKKIPKLEDPAQYSMLGLKPRRADLDMNQHVNNVTYIGWVLESIPQEIIDTHELQVITLDYRRECQQDDIVDSLTTFEIPTRRSQSLLGPTDLPVKQTEHNESQFLHILRLSENGQEINRGRTQWRNKSSR*VLFTSLVSVKLICFTFVVVCIL*S

Camelina Nucleotide Sequence
>contig03899 length=1244 numreads=75 [matches to ORF] cCTATAACACACAAAAcCCtTTTaAtcATAtTcCCtAAAATAACaAAACCCATCTCTCagTTTACCCAGAAATGTTGAAGCTTTCgTGTAATGTAACTGACCACTTACACagCtTTTTctTCTCCGATTCTCGCCGGCTTTTTGtTCCGGTGCATCGCCGTACCGGACCCGTCTCTTGTTTTCAGaTAAAGAAGGAACCtTTaCGGGCAATTctCTCAGCCGATCAAGGAAACAGCAGCCTCCGTGTTGcCGATTCTGtTTCCGATGCTCCTCCGGCGGATCGTCTCCGATTTGGTCGGtTGATGGAAGATgGGtCGTATAAGGAGAAGTTCATTGTTAGAAGCTATGAAGTTGGGATTAACAAAACTGCCACCGTTGAGACAATTGCTAATCTCTTGCAGGAAGTGGCATGTAATCATGTTCAGAAAGTTGGATTTTCGACTGATGGGTTTGCTACAACACTTACTATGAGGAAtTGCATCTCATTTGGGTTACTGCAAGAATGCATATTGAGATTTACAAGTATCCAGCTTGGAGTGATGTGGTTGAGATTGAGACTTGGTGTCAGAGTGAAGGAAGGATTGGAACTAGACGTGATTGGATTTTAAAGGACTGTGCTACCGGtGAAGTTATTGGACGTGCTACAAGcAAGTGGGTGATGATGAACCAAGACACAAgGCGGCTTCAAAGAGTTACAGATGAAGtTCGGGACGAGTACTTGGtTTTTTGTCCTCGAGAACCCAGACTAGCGTTTCCAGAGGAGAACAATAGCAGCTTAAAGAAAATCCCAAAACTGGAAGATCCAGCTCAGTATTCTATGCTTGGGCTTaAACCTAGACGAGCTGATCTAGACATGAACCAGCATGTAAATAATGTCACCTACATTGGGTGGGTCCTTGAGAGCATACCTCAAGAAATTATAGACACGCACGAGCTTCAAGTGATTACTCTAGATTACAGAAGAGAATGCCAGCAAGATGAcATTGTAGATTcACtTACCACATtTGaaAtCCCAACGAgGCGGTCTCAAAGCtTaCtgGGACCAACGGATCTACCAgTCAAGCAAACAGAACACAATGAGAGCCAGTTCTTGCATATCtTGAGGTTGTCAGAAAATGGTCAGGAGATCAATCGTGGGAGAACCCAGTGGAGaaAcaAGTcCtCAAGAtGAGtTCtTTTCACTTCTCTTGTCTCAGTgaAGTTaatTTGCTTcACaTTTgTAGtTGTtTGTATcCTcTGATCAG
>contig02829 length=310 numreads=20 [matches to Gene] CTTCTAAtttTTTTTcCtaaAAAAAAAATaGTTGAAGCTTTCGTGTAATGTGACTGATTCTTCAAAGTTACAGAGAAGCTTACTCTTCTTCTCGCATTCTCATCGATCTGATCCGGTGAATTGCATCCGTCGTAGAATCGTCGCATCtTCCGTCTCTTGTTCTCAGACGAAGAAGACGGGTTTGGTGGATCCTTTGCGAGCGGTTGTATCTGCTGATCAAGGAAGTGTGATTCGAGCTGAACAAGGTTTGGGTACTCTCGCGGATCAGCTCCGATTAGGTAGTTTGACTGAAGATGGTTTGTCTTATAAA

Arabidopsis Orthologous Sequences
>gi|15230256|ref|NP_189147.1| AtFaTA (Arabidopsis FatA acyl-ACP thioesterase); acyl carrier/ acyl-[acyl-carrier-protein] hydrolase [Arabidopsis thaliana] MLKLSCNVTDSKLQRSLLFFSHSYRSDPVNFIRRRIVSCSQTKKTGLVPLRAVVSADQGSVVQGLATLADQLRLGSLTEDGLSYKEKFVVRSYEVGSNKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWGDVVEIETWCQSEGRIGTRRDWILKDSVTGEVTGRATSKWVMMNQDTRRLQKVSDDVRDEYLVFCPQEPRLAFPEENNRSLKKIPKLEDPAQYSMIGLKPRRADLDMNQHVNNVTYIGWVLESIPQEIVDTHELQVITLDYRRECQQDDVVDSLTTTTSEIGGTNGSATSGTQGHNDSQFLHLLRLSGDGQEINRGTTLWRKKPSS >gi|15235555|ref|NP_193041.1| acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl-(acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative [Arabidopsis thaliana] MLKLSCNVTDHIHNLFSNSRRIFVPVHRQTRPISCFQLKKEPLRAILSADHGNSSVRVADTVSGTSPADRLRFGRLMEDGFSYKEKFIVRSYEVGINKTATIETIANLLQEVACNHVQNVGFSTDGFATTLTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDCATGEVIGRATSKWVMMNQDTRRLQRVTDEVRDEYLVFCPPEPRLAFPEENNSSLKKIPKLEDPAQYSMLGLKPRRADLDMNQHVNNVTYIGWVLESIPQEIIDTHELKVITLDYRRECQQDDIVDSLTTSETPNEVVSKLTGTNGSTTSSKREHNESHFLHILRLSENGQEINRGRTQWRKKSSR

Matching Arabidopsis Sequences from Arabidopsis Lipid Metabolism Website
(Open Reading Frame and Gene)

>At3g25110-Gene gtggtttagaagtagatactaaaatgtgtgagttgttatgaaattatacactaatagtgatgcgtaatagaatgagcaacaacaacaaaaaaatctcaacaacaacaacaatacatgtggaggagaagaaaaagtcttcgctcttcaaaaaaaaacaattgcaaaaaaaataaagtcacgtgattaaaccgagaagacagggaagacacgtgcttggctacattacaaaaacagagcacaccacaacaaacaacaacactagccaggctttttttaacattcgtctttgacaattgtccatcatcaatggcattaaatggcaaaaccgtaatttcgaactccaccaaggggcaaacttaaaagtcgatgtctttcttcttcacctcggacccatcggagagaagatactactagaagagattcattcacagtgttgaaattaaaaaaccgaaactttctcgtttcttcttcttcttctccaattttcaaaattcgaaaagATGTTGAAGCTTTCGTGTAATGTGACTGATTCTAAGTTACAGAGAAGCTTACTCTTCTTCTCCCATTCATATCGATCTGATCCGGTGAATTTCATCCGTCGGAGAATTGTCTCTTGTTCTCAGACGAAGAAGACAGGTTTGGTTCCTTTGCGTGCTGTTGTATCTGCTGATCAAGGAAGTGTGGTTCAAGGTTTGGCTACTCTCGCGGATCAGCTCCGATTAGGTAGTTTGACTGAAGATGGTTTATCTTATAAAGAGAAGTTTGTTGTTAGATCTTACGAAGTGGGTAGTAACAAAACCGCTACTGTTGAAACCATTGCTAATCTTTTACAGgtcagatacaaatttttcacgttgtgtgtgtgtgtgtgtgtcttgatgattggttttgttgtaaagtatgaatctttttgtggtgaattgttgtgtatagGAGGTGGGATGTAATCATGCACAAAGTGTTGGTTTTTCGACTGATGGGTTTGCAACAACAACTACTATGAGGAAGTTGCATCTCATTTGGGTTACTGCGAGAATGCATATCGAGATCTATAAGTACCCTGCTTGgtaatttttgcttttgcttgtttatgtatttgtttgtgttttgacaatagtgtgagtagggagttttgaatacttttagcttgtttgtttggttactactacagGGGTGATGTGGTTGAGATAGAGACTTGGTGTCAGAGTGAAGGAAGGATTGGGACAAGGCGTGATTGGATTCTTAAGGATTCTGTCACTGGTGAAGTCACTGGCCGTGCTACAAGgtaggagatatatagcaaagttttggactttctgcattggttagggacatggatataggagttggttacatgttttgtgttgcggtaacttggatttatgggcctgttctgatttgttgtgtggcaattttgttatggtttcagCAAGTGGGTGATGATGAACCAAGACACGAGACGGCTTCAGAAAGTTTCTGATGATGTTCGGGACGAGTACTTGGTCTTCTGTCCTCAAGAACCGAGgtaaaggacactttggtatcagggcaaagcttgctggtcaatgaatgctaagtatgtttctttctatgtatcttatagGTTAGCATTTCCGGAAGAGAATAACAGAAGCTTGAAGAAAATCCCGAAACTCGAAGATCCGGCTCAGTATTCAATGATTGGGCTTAAGgtacaaacaatagcattattagaactctttctccaactttaggcttcaaaatatcttaaaggctttgtgaacatgtttttgcagCCTAGACGAGCTGATCTCGACATGAACCAGCATGTCAATAATGTCACCTATATTGGATGGGTTCTCGAGgtaagtcactaggtttattagtaaagctcaatgtgcttgtatgtgaactttagtaatcatatgatcttgtttcctggtaattgcagAGCATACCACAAGAAATTGTAGACACGCACGAGCTTCAGGTCATAACTCTGGATTATAGAAGAGAATGTCAACAAGACGATGTGGTGGATTCACTCACCACCACCACCTCTGAAATTGGTGGAACCAATGGCTCTGCCACGTCTGGCACACAGGGCCACAACGATAGCCAGTTCTTGCACCTCCTGAGGTTGTCTGGAGATGGTCAGGAGATCAACCGCGGGACAACTCTGTGGAGAAAGAAGCCTTCAAGTTAAgaaatagacaatgtctttagccattttgttctcaagtttccatcatctcaatgaagatttcgcttcacgagtctgagcaggtctccatttttttctctttcaagtttgggttagactagagggaactggattgttggagtattaatctttgttgaatttcattatgtttgttcatgtttttgtacaaattttggggatttagccaaacccatatcgtctttggtcttgtcttgtgcctgcgtgtatttttaatctatccgttcaaaacacagattgttcattagatgttttatataaacagagttaaagacctgaagaggtaaagagttaacaccaaatgagtaaaggaccttttcacataaaactctatggttatttgattaaacaagttacatgattgataacagattgtgcctattacacaggctcgtaaaaaatgcaaacagtgagataaaactgaaaactataaaagaaaacacactgaatcgaagaacaatgag >At3g25110-ORF ATGTTGAAGCTTTCGTGTAATGTGACTGATTCTAAGTTACAGAGAAGCTTACTCTTCTTCTCCCATTCATATCGATCTGATCCGGTGAATTTCATCCGTCGGAGAATTGTCTCTTGTTCTCAGACGAAGAAGACAGGTTTGGTTCCTTTGCGTGCTGTTGTATCTGCTGATCAAGGAAGTGTGGTTCAAGGTTTGGCTACTCTCGCGGATCAGCTCCGATTAGGTAGTTTGACTGAAGATGGTTTATCTTATAAAGAGAAGTTTGTTGTTAGATCTTACGAAGTGGGTAGTAACAAAACCGCTACTGTTGAAACCATTGCTAATCTTTTACAGGAGGTGGGATGTAATCATGCACAAAGTGTTGGTTTTTCGACTGATGGGTTTGCAACAACAACTACTATGAGGAAGTTGCATCTCATTTGGGTTACTGCGAGAATGCATATCGAGATCTATAAGTACCCTGCTTGGGGTGATGTGGTTGAGATAGAGACTTGGTGTCAGAGTGAAGGAAGGATTGGGACAAGGCGTGATTGGATTCTTAAGGATTCTGTCACTGGTGAAGTCACTGGCCGTGCTACAAGCAAGTGGGTGATGATGAACCAAGACACGAGACGGCTTCAGAAAGTTTCTGATGATGTTCGGGACGAGTACTTGGTCTTCTGTCCTCAAGAACCGAGGTTAGCATTTCCGGAAGAGAATAACAGAAGCTTGAAGAAAATCCCGAAACTCGAAGATCCGGCTCAGTATTCAATGATTGGGCTTAAGCCTAGACGAGCTGATCTCGACATGAACCAGCATGTCAATAATGTCACCTATATTGGATGGGTTCTCGAGAGCATACCACAAGAAATTGTAGACACGCACGAGCTTCAGGTCATAACTCTGGATTATAGAAGAGAATGTCAACAAGACGATGTGGTGGATTCACTCACCACCACCACCTCTGAAATTGGTGGAACCAATGGCTCTGCCACGTCTGGCACACAGGGCCACAACGATAGCCAGTTCTTGCACCTCCTGAGGTTGTCTGGAGATGGTCAGGAGATCAACCGCGGGACAACTCTGTGGAGAAAGAAGCCT Right click here to download alligned nucleotide ORF, GENE, or protein sequences.



last updated by Jason Macrander 6/9/2010