Synthesis of Fatty Acids in Plastids
Putative Function of Protein
Protein (locus-based name)
Contig #
Contig Name
Length (NT)
# reads
NOTES  
  Plastidial Homomeric Acetyl-CoA Carboxylase
At1g36180
3
Contig51962
550
26
  Protein sequences do not line up correctly.
Contig79615
92
75
   
Contig51963
173
75
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------  
  Acyl-ACP Thioesterase FatA
At3g25110
**1-4
Contig18259
232
385
   
Contig18319
176
385
   
Contig66993
251
35
   
Contig22419
845
35
  Acyl-ACP Thioesterase FatA
At4g13050
**2-5
Contig56618
806
75
   
Contig58641
728
66
   
Contig05498
773
67
   
Contig71531
104
35
   
Contig71530
415
35
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------  
  Acyl-ACP Thioesterase FatB
At1g08510
4
Contig06440
395
54
   
Contig25977
1108
54
   
Contig10137
1015
78
   
Contig24878
391
61
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------  
  Plastidial Pyruvate Dehydrogenase E1alpha subunit
At1g01090
**1-10
Contig74979
277
355
   
Contig05173
510
353
   
Contig36737
230
2
   
Contig36738
306
358
   
Contig76656
76
2
   
Contig64336
537
2
   
Contig36740
129
2
   
Contig69357
405
358
   
Contig36739
265
355
   
Contig65653
269
2
  Plastidial Pyruvate Dehydrogenase E1alpha subunit
At1g24180
**2-5
Contig57570
477
121
   
Contig49438
747
89
   
Contig10241
477
128
   
Contig64160
242
17
   
Contig49439
465
17
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Plastidial Pyruvate Dehydrogenase E1beta subunit
At1g30120
**1 - 6
Contig58596
226
393
2 **s  
   
Contig19813
228
307
Both Arabidopsis sequences very similar NOT ALL LENGTHS ARE CORRECT  
   
Contig72454
174
87
   
Contig51225
25
1195
   
Contig19154
174
568
   
Contig63790
228
607
  Plastidial Pyruvate Dehydrogenase E1beta subunit
At2g34590
**2 - 5
Contig32865
116
42
   
Contig41674
100
959
   
Contig04134
116
991
   
Contig57019
59
964
   
Contig51523
174
509
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Plastidial Dihydrolipoamide Acetyltransferase, pyruvate DH complex
At1g34430
** 1 - 4
Contig03475
871
355
2 **s  
 
recheck this one
At1g54220
Contig70112
828
365
Both Arabidopsis sequences very similar NOT ALL LENGTHS ARE CORRECT  
 
recheck this one
At3g13930
Contig64635
826
80
   
Contig60420
843
355
  Plastidial Dihydrolipoamide Acetyltransferase, pyruvate DH complex
At3g25860
** 2 - 2
Contig19526
91
347
   
Contig19525
729
18
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Plastidial Dihydrolipoamide Dehydrogenase, pyruvate DH complex
At3g16950
10
Contig24628
832
151
Both Arabidopsis sequences very similar NOT ALL LENGTHS ARE CORRECT  
  Plastidial Dihydrolipoamide Dehydrogenase, pyruvate DH complex
At4g16155
Contig13647
772
89
   
Contig25135
98
26
   
Contig25871
361
146
   
Contig65286
239
151
   
Contig26313
239
26
   
Contig22276
1029
406
   
Contig75847
1038
405
   
Contig74126
24
26
   
Contig61782
456
26
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Plastidial Lipoate Synthase
At5g08410
5
Contig56148
445
54
NOT ALL LENGTHS ARE CORRECT  
   
Contig56149
394
60
   
Contig28031
388
58
   
Contig77175
31
74
   
Contig6224
323
74
   
gene duplication?
1
Contig22007
299
30
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Plastidial Lipoyltransferase
At4g31050
4
Contig16985
167
37
NOT ALL LENGTHS ARE CORRECT  
   
Contig50035
318
22
   
Contig10966
502
37
   
Contig06871
467
22
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Acetyl-CoA carboxylase, a-carboxyltransferase
At2g38040
8
Contig21079
42
115
Same_as-Acetyl-CoA carboxylase, b-carboxyltransferase. LENTGTHS ARE INCORRECT.  
   
Contig60461
36
25
 
recheck these
Contig79114
68
25
   
Contig79113
635
25
   
Contig20910
753
105
   
Contig75253
774
121
   
Contig79112
136
25
   
Contig18225
745
25
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Acetyl-CoA carboxylase, b-carboxyltransferase
AtCg00500
8
Contig21079
42
115
Same_as-Acetyl-CoA carboxylase, a-carboxyltransferase. LENGTHS ARE INCORRECT.  
   
Contig60461
36
25
 
recheck these
Contig79114
68
25
   
Contig79113
635
25
   
Contig20910
753
105
   
Contig75253
774
121
   
Contig79112
136
25
   
Contig18225
745
25
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Acetyl-CoA carboxylase, biotin carboxyl carrier protein
At5g15530a
**1-6
Contig70036
63
89
   
At5g15530b
Contig66245
584
63
   
Contig52923
584
89
   
Contig20160
698
79
   
Contig23670
68
63
   
Contig60896
427
63
 
             
  Acetyl-CoA carboxylase, biotin carboxyl carrier protein
At5g16390
**3-11
Contig48315
967
208
Lenths are incorrect. Possible gene duplication? Later 1/2 of some sequences are off. Look at the alignment to clarify.  
   
Contig57537
245
283
   
Contig18763
969
126
   
Contig72344
163
126
   
Contig69956
470
217
   
Contig24961
371
217
   
Contig72687
163
243
   
Contig71357
307
243
   
Contig24824
461
243
   
Contig63863
136
243
   
Contig05441
1038
243
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Acetyl-CoA carboxylase, biotin carboxylase
At5g35360
8
Contig21079
42
115
   
Contig60461
36
25
   
Contig79114
68
25
   
Contig79113
635
25
   
Contig20910
753
105
   
Contig75253
774
121
   
Contig79112
136
25
   
Contig18225
745
25
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Malonyl-CoA : ACP Malonyltransferase
At2g30200
5
Contig17165
685
245
   
Contig21657
79
151
   
Contig21658
840
245
   
Contig75741
908
144
   
Contig20915
761
151
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Ketoacyl-ACP Synthase I
At5g46290
1
Contig50122
1736
62
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Ketoacyl-ACP Synthase II
At1g74960
**1 - 10
Contig64400
232
251
2 **s  
     
Contig63693
390
143
Check these against Arabidopsis DB.  
     
Contig24132
398
251
   
Contig23068
452
272
   
Contig23168
457
143
   
Contig70983
861
245
   
Contig22173
861
143
   
Contig68331
52
143
   
Contig21533
227
143
   
Contig21534
257
143
   
**2 - 9
Contig34275
789
82
   
Contig68296
629
85
   
Contig68294
102
82
   
Contig28295
145
2
   
Contig39441
475
2
   
Contig75795
319
2
   
Contig35578
533
2
   
Contig12841
378
17
   
Contig05355
235
2
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Ketoacyl-ACP Synthase III
At1g62640a
5
Contig61757
675
211
     
Contig27223
890
156
   
Contig74255
654
246
   
Contig64199
270
45
   
Contig27216
645
45
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------  
  Plastidial Ketoacyl-ACP Reductase
At1g24360
**1-5
Contig06716
511
115
   

Recheck this one

Contig24108
530
117
   
Proteins do not align.
Contig25571
717
107
   
Contig67034
152
262
   
Contig79319
287
262
   
At1g62610
**2-3
Contig54514
444
145
   
At3g46170
Contig20423
506
26
   
At3g55290
Contig20422
507
145
   
At3g55310
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Plastidial Hydroxyacyl-ACP Dehydrase
At2g22230
**1-2
Contig28146
       
Contig28145
   
   
At5g10160
**2-5

Contig07620

       
Contig57032
   
       
Contig26202
   
       
Contig08504
   
       
Contig26110
   
       
Contig08504
   
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------  
  Plastidial Enoyl-ACP Reductase
At2g05990
9
Contig06225
117
101
NOT ALL LENGTHS ARE CORRECT  
   
Contig22111
466
31
   
Contig23772
34
121
   
Contig23771
26
240
   
Contig61353
255
240
   
Contig17392
103
121
   
Contig20995
175
121
   
Contig77909
211
240
   
Contig08845
836
240
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Stearoyl-ACP Desaturase
At1g43800
**1-3
Contig72709
223
219
   
Contig25478
1075
219
   
Contig72711
1077
53
   
At2g43710
**2-3
Contig59087
127
176
   
Contig31615
1109
48
   
Contig71937
1113
176
   
At3g02610
**3-1
Contig00095
1338
64
Same match.  
   
At3g02620
**4-1
Contig00095
1338
64
   
At3g02630
**5-3
Contig53227
1106
78
   
Contig65877
1118
100
   
Contig03962
1199
112
   
At5g16230
**6-5
Contig39886
1088
77
   
Contig21197
990
61
   
Contig54001
209
77
   
Contig73587
156
26
   
Contig39884
936
26
   
At5g16240
No sequences
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Plastidial Acyl Carrier Protein
At1g54580
**1 - 5
Contig04475
557
32
2 **s  
   
At1g54630
Contig12739
500
33
Same as Plastidial Holo-ACP Synthase NOT ALL LENGTHS ARE CORRECT  
   
At3g05020
Contig14756
307
31
   
At4g25050
Contig61846
155
11
   
At5g27200
Contig61847
121
19
 
Redo this one
**2 - 1
Contig16879
324
11
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Plastidial Holo-ACP Synthase
At3g11470
**1 - 5
Contig04475
557
32
2 **s  
   
Contig12739
500
33
   
   
Contig14756
307
31
   
   
Contig61846
155
11
   
   
Contig61847
121
19
   
   
No Matches
**2 - 1
Contig16879
324
11
   
 
Synthesis of Membrane Lipids in Plastids
Putative Function of Protein
Protein (locus-based name)
Contig #
Contig Name
Length (NT)
# reads
NOTES  
  Plastidial Dihydroxyacetone-Phosphate Reductase
At5g40610
** 1 - 6
Contig20484
       
       
Contig20485
       
       
Contig22820
       
       
Contig22819
       
       
Contig60844
       
   
 
Contig27633
       
     
 

Plastidial Glycerol-Phosphate Acyltransferase (GPAT)

At1g322200a
** 1-6
Contig07401
       
       
Contig09535
       
       
Contig07573
       
       
Contig76791
       
       
Contig43328
       
       
Contig43327
       
       
Contig62628
       
   
At1g322200b
        b - alternative splice form (no sequence available)  
     
  Plastidial 1-Acylglycerol-Phosphate Acyltransferase (LPAAT)
At4g30580
** 1-3
Contig49155
       
       
Contig66908
       
   
 
Contig37891
       
     
  Plastidial CDP-Diacylglycerol Synthetase
At2g45150
** 1-9
Contig11922
Contig64359
Contig33974
Contig33973
Contig69221
Contig69222
Contig33976
Contig33975
Contig77759
       
   
At3g60620
** 2 - 10
Contig33974
Contig33973
Contig69221
Contig69222
Contig64359
Contig33975
Contig33976
Contig77759
Contig11922
Contig53219
       
   
At4g26770
** 3-8
Contig57152
Contig16771
Contig13001
Contig13000
Contig44193
Contig31419
Contig08397
Contig46226
       
     
  Plastidial Phosphatidylglycerol-Phosphate Synthase
At2g39290
** 1-10
Contig60412
Contig74809
Contig45739
Contig34802
Contig18512
Contig74071
Contig58348
Contig58349
Contig08337
Contig47233
       
     
  Plastidial Phosphatidylglycerol-Phosphate Phosphatase

no candidate

           
     
  Phosphatidylglycerol Desaturase (palmitate specific) (FAD4)
no candidate
           
     
  Plastidial Oleate Desaturase (FAD6)
At4g30950
** 1-5
Contig59513
Contig05621
Contig06101
Contig68514
Contig18160
       
     
  Plastidial Linoleate Desaturase
At3g11170
** 1-9
Contig05126
Contig41736
Contig41737
Contig08990
Contig16321
       
   
At5g05580
** 2-5
Contig05126
Contig08990
Contig41737
Contig41736
Contig16321
       
     
  Plastidial Phosphatidate Phosphatase
At2g01180
** 1-1
Contig79399
       
     
  Monogalactosyldiacylglycerol (MGDG) Synthase
At4g31780
** 1-5
Contig41569
Contig72003
Contig03324
Contig64662
Contig50134
       
   
At5g20410
** 2-1
Contig12657
       
   
At2g11810
** 3-1
Contig12657
       
     
  MGDG Desaturase (palmitate-specific, FAD5)

At3g15850

** 1-5
Contig07403
Contig18869
Contig47386
Contig18237
Contig18174
       
     
  Digalactosyldiacylglycerol (DGDG) Synthase
At3g11670
** 1-3
Contig28121
Contig28074
Contig28073
       
   
At4g00550a
** 2-3
Contig27093
Contig68171
Contig17059
       
   
At4g00550b
** 1-1
Contig27093
       
     
  UDP-Sulfoquinovose Synthase
At4g33030
** 1-5
Contig48192
Contig78254
Contig37057
Contig10465
Contig37056
       
     
  Sulfolipid Synthase
At5g01220a
** 1-5
Contig78101
Contig38885
Contig71444
Contig38880
Contig38881
    (same as alternative splice form)  
   
At5g01220b
** 2-5
Contig78101
Contig38885
Contig71444
Contig38880
Contig38881
    (same as alternative splice form)  
     
  Plastidial 1-Acylglycerophosphorylcholine Acyltransferase
See E3
           
     
  Permease-like Protein of Outer Chloroplast Envelope (TGD1)
At1g19800
** 1-3
Contig09150
Contig04119
Contig54352
       
     
         
Synthesis of Membrane Lipids in Endomembrane System
  Putative Function of Protein
Protein (locus-based name)
Contig #
Contig Name
Length (NT)
# reads
NOTES  
  ER Dihydroxyacetone-Phosphate Reductase
A2t2g41540 (a and b)
** 1-17
Contig58133
Contig41382
Contig41381
Contig41380
Contig41379
Contig08431
Contig78236
Contig73381
Contig41383
Contig73380
Contig65818
Contig13496
Contig19145
Contig21524
Contig05975
Contig20855
Contig12285
       
   
At3g07690
** 1-17
Contig21524
Contig19145
Contig05975
Contig20855
Contig12285
Contig73380
Contig73381
Contig58133
Contig41382
Contig41381
Contig41380
Contig41379
Contig08431
Contig78236
Contig41383
Contig65818
Contig13496
       
   
At2g40690
** 1-1
Contig38336
       
     
  ER Glycerol-Phosphate Acyltransferase (GPAT)
At5g06090
** 1-2
Contig00833
Contig00832
       
   
At3g11430
** 2-2
Contig00833
Contig00832
       
   
At1g01610
** 3-2
Contig00833
Contig00832
       
     
  ER 1-Acylglycerol-Phosphate Acyltransferase (LPAAT)
At3g18850
** 1-12
Contig21912
Contig05127
Contig06174
Contig20465
Contig19942
Contig19912
Contig79237
Contig79238
Contig77977
Contig04347
Contig03167
Contig21465
       
   
At1g75020b
** 2-1
Contig38687
       
   
At1g75020a
** 3-1
Contig38687
       
   
At1g512260
** 4-1
Contig38053
       
   
At3g57650
** 5-11
Contig39728
Contig73318
Contig39729
Contig72309
Contig16388
Contig72310
Contig76718
Contig72085
Contig01649
Contig72084
Contig38053
       
     
  ER Phosphatidate Phosphatase ** 1-5
Contig42747
Contig07500
Contig10906
Contig42746
Contig42745
       
   
           
  ER Diacylglycerol Cholinephosphotransferase
At3g25585
** 1-9
Contig60788
Contig18159
Contig49134
Contig63399
Contig63398
Contig49135
Contig78829
Contig76943
Contig49133
       
   
           
  ER Oleate Desaturase (FAD2)
At3g12120
** 1-6
Contig67524
Contig50691
Contig71226
Contig35675
Contig35674
Contig78995
       
   
           
  ER Linoleate Desaturase (FAD3)
At2g29980
** 1-1
Contig16321
       
   
           
  ER CDP-Diacylglycerol Synthetase
At1g62430
** 1-9
Contig57152
Contig16771
Contig13001
Contig13000
Contig75595
Contig08397
Contig44193
Contig31419
Contig46226
       
   
At4g22340
** 1-8
Contig44193
Contig31419
Contig46226
Contig08397
Contig57152
Contig16771
Contig13001
Contig13000
       
   
           
  ER Phosphatidylglycerol-Phosphate Synthetase ** 1-10
Contig58348
Contig74071
Contig58349
Contig47233
Contig08337
Contig74809
Contig45739
Contig34802
Contig60412
Contig18512
       
   
           
  ER Phosphatidylglycerol-Phosphate Phosphatase
No Candidate
           
   
           
  Phosphatidylserine Synthase
At1g68000
** 1-6
Contig70896
Contig70738
Contig22134
Contig67202
Contig66688
Contig41274
       
   
At4g38570
** 1-7
Contig67202
Contig66688
Contig41274
Contig70896
Contig70738
Contig22134
Contig07134
       
   
           
  Phosphatidylserine Synthase
No Candidate
           
   
           
  Choline Kinase
At4g09760
** 1-5
Contig10162
Contig47528
Contig47529
Contig76896
Contig47530
       
   
At1g71697
** 2-5
Contig47528
Contig47529
Contig76896
Contig47530
Contig10162
       
   
At1g74320
** 3-2
Contig69109
Contig31163
       
   
At1g34100
** 4-2
Contig10162
Contig47528
       
                 
  Ethanolamine Kinase
At2g26830
** 1-3
Contig47191
Contig15553
Contig12180
       
                 
  CDP-Choline Synthetase
At2g32260
** 1-4
Contig23532
Contig62609
Contig62608
Contig12869
       
   
At4g15130
** 2-4
Contig62609
Contig62608
Contig12869
Contig23532
       
                 
  CDP-Ethanolamine Synthetase
At2g38670
** 1-1
Contig45701
       
   
           
  ER Phosphatidylserine Decarboxylase
At4g25970a
** 1-3
Contig37692
Contig37691
Contig08184
       
   
At4g25970b
** 2-3
Contig37692
Contig37691
Contig08184
       
   
At5g57190
** 3-3
Contig37692
       
       
Contig37691
       
       
Contig08184
       
                 
  Phospholipid Base-Exchange
At1g15110
** 1-3
Contig23115
Contig23114
Contig26845
       
   
           
  LCB1 subunit of Serine Palmitoyltransferase
At4g36480a
**1-3
contig45908
contig45907
contig62697
       
   
At4g36480b
**2-3
contig45908
contig45907
contig62697
       
   
           
  LCB2 subunit of Serine Palmitoyltransferase
At5g23670
** 1-15
Contig07768
Contig48581
Contig58580
Contig58581
Contig75104
Contig46085
Contig65993
Contig48580
Contig46084
Contig48579
Contig46083
Contig44160
Contig44161
Contig44159
Contig44158
       
   
At3g48780
** 2-15
Contig75104
Contig46085
Contig65993
Contig46084
Contig07768
Contig48581
Contig58580
Contig58581
Contig46083
Contig48580
Contig48579
Contig44160
Contig44161
Contig44159
Contig44158
       
   
           
  Ketosphinganine Reductase
At3g06060
** 1-9
Contig62015
Contig21265
Contig75342
Contig78047
Contig78338
Contig65079
Contig11430
Contig09911
Contig08464
       
   
At5g19200
** 2-7
Contig11430
Contig09911
Contig21265
Contig08464
Contig62015
Contig75342
Contig78047
       
   
           
  Ceramide Synthase (AcylCoA : Sphingobase Acyltransferase)
At3g25540
** 1-7
Contig48861
Contig10018
Contig02754
Contig53653
Contig61082
Contig47167
Contig47166
       
   
At3g19260
** 2-9
Contig16311
Contig27493
Contig65326
Contig15433
Contig69989
Contig52321
Contig09003
Contig12711
Contig09002
       
   
At1g13580

** 1-7

Contig53653
Contig61082
Contig47167
Contig47166
Contig48861
Contig10018
Contig02754
       
                 
  Ceramide Synthase (Acyl-CoA-independent) / Ceramidase
At4g22330
** 1-1
Contig56788
       
   
           
  Ceramide Sphingobase C4-Hydroxylase
At1g69640
** 1-6
Contig10921
Contig44034
Contig44036
Contig11661
Contig07640
Contig16337
       
   
At1g14290
** 1-4
Contig07640
Contig16337
Contig10921
Contig55288
       
   
           
  Ceramide Sphingobase 8 Desaturase
At3g61580
** 1-13
Contig31250
Contig74512
Contig67036
Contig74513
Contig29297
Contig45016
Contig74596
Contig24952
Contig24953
Contig00581
Contig67314
Contig67315
Contig25225
Contig29261
       
   
At2g46210
** 2-13
Contig00581
Contig67315
Contig67314
Contig29261
Contig31250
Contig74512
Contig74513
Contig29297
Contig67036
Contig45016
Contig74596
Contig24953
Contig24952
       
   
           
  Glucosylceramide Synthase (UDP-glucose-dependent)
At2g19880
** 1-1
Contig15107
       
   
           
  Ceramide Fatty Acyl Amide -Hydroxylase
At4g20770
** 1-4
Contig55194
Contig70181
Contig47915
Contig04628
       
   
At4g20870
** 2-13
Contig66518
Contig25071
Contig25092
Contig59118
Contig25893
Contig25470
Contig25468
Contig25469
Contig74505
Contig55194
Contig70181
Contig47915
Contig04628
       
   
           
  ER 1-Acylglycerophosphorylcholine Acyltransferase (Phosphatidylinositol SynthaseEC 2.3.1.23) See ER 1-Acylglycerol-Phosphate Acyltransferase        
                 
  ER 2-Acylglycerophosphorylcholine Acyltransferase (EC 2.3.1.62)
See ER 1-Acylglycerol-Phosphate Acyltransferase
       
 
           
  ER 2-Acylglycerol-Phosphate Acyltransferase (EC 2.3.1.52)
See ER 1-Acylglycerol-Phosphate Acyltransferase
       
   
           
  Phosphoethanolamine N-Methyltransferase (EC 2.1.1.103)
At3g18000
** 1 - 9
Contig51808
Contig77848
Contig69988
Contig51807
Contig22384
Contig54958
Contig13945
Contig42837
Contig08769
       
   
At1g48600
** 2 - 9
Contig13945
Contig42837
Contig51808
Contig77848
Contig69988
Contig51807
Contig08769
Contig22384
Contig54958
       
   
At1g73600a
** 3 - 10
Contig51808
Contig77848
Contig69988
Contig51807
Contig22384
Contig54958
Contig42837
Contig13945
Contig08769
Contig49936
       
   
At1g73600b
** 4 - 9
Contig51808
Contig77848
Contig69988
Contig51807
Contig22384
Contig54958
Contig42837
Contig13945
Contig08769
       
   
           
  Ceramide Sphingobase D4 Desaturase (EC 1.14.99.*)
At4g04930
 
No Matches Found
       
   
           
                 
Metabolism of Acyl-Lipids in Mitochondria
  Mitochondrial Ketoacyl-ACP Synthase
At2g04540
** 1 - 25
Contig29663
Contig29662
Contig29660
Contig29664
Contig29659
Contig29666
Contig29665
Contig29650
Contig64647
Contig29661
Contig76464
Contig74443
Contig74442
Contig09383
Contig40818
Contig06026
Contig29654
Contig29653
Contig54193
Contig29649
Contig29657
Contig29652
Contig15509
Contig29655
Contig29658
       
                 
  Mitochondrial Ketoacyl-ACP Reductase
At1g63380
** 1 - 3
Contig54514
Contig20423
Contig20422
       
                 
  Mitochondrial Lipoyltransferase
At1g04640
** 1 - 7
Contig14804
Contig53229
Contig53230
Contig53231
Contig50453
Contig53232
Contig19146
       
   
At1g47580
** 2 - 5
Contig16985
Contig50035
Contig39257
Contig10966
Contig06871
       
                 
  Mitochondrial Phosphatidylglycerol-Phosphate Synthase
At4g04870
** 1 - 5
Contig28420
Contig28419
Contig28421
Contig00266
Contig00267
       
                 
  Mitochondrial Phosphatidylglycerol-Phosphate Phosphatase     No Candidate        
                 
  Cardiolipin Synthase     No Candidate        
                 
  α-Ketoacid Decarboxylase E1a of BC Ketoacid DH Complex At5g09300 ** 1 - 20
Contig27353
Contig25944
Contig26340
Contig75232
Contig26024
Contig78525
Contig67545
Contig75621
Contig31880
Contig31877
Contig78524
Contig39486
Contig49719
Contig35951
Contig66681
Contig66680
Contig31881
Contig57749
Contig31879
Contig31878
       
    At1g21400 ** 2 - 32
Contig49719
Contig35951
Contig66681
Contig66680
Contig31881
Contig31880
Contig57749
Contig39486
Contig75621
Contig31879
Contig31877
Contig67545
Contig31878
Contig69142
Contig75471
Contig75472
Contig10392
Contig27353
Contig25944
Contig26340
Contig75232
Contig26024
       
                 
  α-Ketoacid Decarboxylase E1b of BC Ketoacid DH Complex At3g13450 ** 1 - 3
Contig34099
Contig59658
Contig34097
       
    At1g55510 ** 2 - 3
Contig34099
Contig59658
Contig34097
       
                 
  Dihydrolipoamide Transacylase of Branched Chain Ketoacid DH Complex At3g06850 ** 1 - 6
Contig05857
Contig35819
Contig59845
Contig59846
Contig35821
Contig35820
       
                 
  Mitoch. Dihydrolipoamide Dehydrogenase of BCKDH Complex At1g48030 ** 1 - 15
Contig01057
Contig10464
Contig33720
Contig33719
Contig60974
Contig06117
Contig33721
Contig31251
Contig31253
Contig78418
Contig78417
Contig72942
       
    At3g17240a ** 2 - 15
Contig31251
Contig31253
Contig78417
Contig78418
Contig10464
Contig01057
Contig72942
Contig33720
Contig33719
Contig60974
Contig06117
Contig33721
Contig05981
Contig01343
Contig33722
       
    At3g17240b ** 3 - 10
Contig05981
Contig31253
Contig78417
Contig31251
Contig78418
Contig72942
Contig01343
Contig01057
Contig10464
Contig33720
       
                 
  Isovaleryl-CoA Dehydrogenase At3g45300a ** 1 - 3
Contig65377
Contig29115
Contig29114
       
                 
  Methylcrotonyl-CoA Carboxylase - biotinylated subunit At3g45300a ** 1 - 3
Contig35928
Contig10606
Contig35930
       
                 
  Methylcrotonyl-CoA Carboxylase - non-biotinylated subunit At4g34030a ** 1 - 9
Contig50495
Contig69044
Contig29769
Contig74943
Contig78991
Contig29771
Contig29768
Contig29770
Contig29767
       
    At4g34030b ** 2 - 9
Contig29771
Contig29769
Contig69044
Contig50495
Contig74943
Contig78991
Contig29768
Contig29770
Contig29767
       
                 
  Mitochondrial Enoyl-CoA Hydratase
At4g31810
** 1 - 5
Contig36612
Contig02572
Contig76650
Contig68275
Contig64654
       
    At3g60510 ** 2 - 1
Contig06252
       
                 
  Mitochondrial Glycerol-Phosphate Acyltransferase (GPAT) At1g06520  
No Matches Found
       
    At1g02390 ** 2 - 6
Contig26152
Contig49028
Contig66924
Contig26287
Contig26286
Contig26449
       
    At4g01950 ** 3 - 3
Contig49028
Contig26152
Contig26286
       
                 
  Mitochondrial 1-Acylglycerol-Phosphate Acyltransferase (LPAAT) At4g30580 ** 1 - 3
Contig49155
Contig66908
Contig37891
       
                 
  Mitochondrial Phosphatidate Phosphatase At3g02600 ** 1 - 1
Contig45142
       
                 
  Mitochondrial Acyl Carrier Protein At2g44620 ** 1 - 4
Contig05753
Contig71591
Contig71592
Contig67187
       
    At1g65290 ** 2 - 2
Contig71426
Contig69081
       
    At5g47630 ** 3 - 1
Contig55271
       
                 
  Malonyl-CoA Synthase No Candidate            
                 
  Mitochondrial Malonyl-CoA : ACP Malonyltransferase No Candidate            
                 
  Malonyl-[ACP] Synthase No Candidate            
                 
  Mitochondrial CDP-Diacylgycerol Synthetase See Plastidial CDP-Diacylglycerol Synthetase        
                 
  Mitochondrial 1-Acylglycerophosphorylcholine Acyltransferase See 1-Acylglycerol-Phosphate Acyltransferase or        
    Mitochondrial Glycerol-Phosphate Acyltransferase (MSU link)        
                 
  Mitochondrial Phosphatidylserine Decarboxylase At4g16700 ** 1 - 4
Contig39329
Contig02999
Contig03000
Contig57642
       
                 
  Mitochondrial Glycerol-3-Phosphate Dehydrogenase At3g10370 ** 1 - 1
Contig10223
       
                 
  Mitochondrial Diacylglycerol Cholinephosphotransferase At1g13560 ** 1 - 9
Contig63399
Contig63398
Contig49135
Contig49134
Contig78829
Contig18159
Contig60788
Contig76943
Contig49133
       
                 
Synthesis and Storage of Oil
Putative Function of Protein
Protein (locus-based name)
Contig #
Contig Name
Length (NT)
# reads
NOTES  
 

Acyl-CoA : Diacylglycerol Acyltransferase

At2g19450
**1-6

Contig76903

       
   
Contig76904
       
   
Contig02707
       
   
Contig02708
       
   
Contig02705
       
   
Contig02706
       
   
At3g51520
**2
       
   
       
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Caleosin

At4g26740

**1-3
Contig19103
       
   
 
Contig70290
       
   
 
Contig75089
       
   
At5g55240
**2-4
Contig67604
       
   
Contig49857
       
   
 
Contig06452
       
   
 
Contig35139
       
   
At1g70670

**3/4-5

Contig19772
       
   
At1g70680
Contig19771
       
       
Contig72490
       
       
Contig62644
       
       
Contig67588
       
   
At1g23240

none

       
   
At1g33380
**6-4
Contig71352
       
   
Contig68736
       
       
Contig23925
       
       
Contig24396
       
   
At1g23250

none

       
  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Oil-Body Oleosin

At3g01570

**1-2
Contig57667
       
     
Contig57668
       
   
At4g25140
**2-4
Contig72104
       
     
Contig64425
       
     
Contig75322
       
     
Contig05087
       
   
At5g51210
**3-3
Contig61682
       
     
Contig16761
       
     
Contig55526
       
   
At5g40420
**4-5
Contig79123
       
       
Contig72529
       
       
Contig57799
       
     

Contig67687

       
     
Contig70661
       
   
At3g18570

**5-3

Contig19338
       
     
Contig77181
       
   
Contig56366
       
   
At1g48990
**6-1
Contig22442
       
   
At2g25890
**7-3
Contig40819
       
       
Contig67634
       
       
Contig11408
       
 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
  Phospholipid-Diacylglycerol_Acyltransferase
At5g13640
           
   
At3g44830
           
   
           
     
         
Degradation of Storage Lipids and Straight Fatty Acids
  Putative Function of Protein
Protein (locus-based name)
Contig #
Contig Name
Length (NT)
# reads
NOTES  
  Triacylglycerol Lipase At1g10740a ** 1 - 7
Contig36630
Contig34058
Contig53808
Contig52807
Contig13298
Contig70539
Contig09554
       
    At1g10740b ** 2 - 7
Contig36630
Contig52807
Contig34058
Contig53808
Contig13298
Contig70539
Contig09554
       
    At5g18630 ** 3 - 8
Contig59123
Contig70516
Contig05757
Contig78773
Contig40272
Contig40271
Contig15379
Contig06915
       
    At5g18640 ** 4 - 8
Contig78773
Contig40271
Contig40272
Contig59123
Contig70516
Contig05757
Contig15379
Contig06915
       
                 
    At2g15230 ** 5 - 4
Contig55910
Contig49930
Contig55911
Contig08484
       
                 
  Monoacylglycerol Lipase At1g11090 ** 1 -7
Contig61536
Contig66026
Contig60667
Contig46967
Contig46966
Contig60367
Contig46965
       
    At1g18360 ** 2 - 8
Contig11533
Contig56251
Contig55954
Contig21116
Contig21115
Contig23311
Contig22252
Contig12207
       
    At1g52760 ** 3 - 11
Contig56854
Contig56853
Contig56855
Contig30906
Contig05049
Contig69093
Contig74950
Contig74951
Contig05717
Contig30904
Contig30905
       
    At1g73480 ** 4 -8
Contig21115
Contig55954
Contig21116
Contig11533
Contig56251
Contig23311
Contig22252
Contig12207
       
    At1g77420 ** 5 - 4
Contig71600
Contig56516
Contig32539
Contig04213
       
    At2g39400 ** 6 - 5
Contig17354
Contig03874
Contig06836
Contig61213
Contig14340
       
    At2g39410 ** 7 - 4
Contig07638
Contig03874
Contig06836
Contig17354
       
    At2g39420 ** 8 - 5
Contig07638
Contig06836
Contig17354
Contig03874
Contig14340
       
    At2g47630 ** 9 - 7
Contig24076
Contig24075
Contig23677
Contig23676
Contig57551
Contig20033
Contig40227
       
    At3g55180 **10 - 5
Contig14340
Contig17354
Contig03874
Contig06836
Contig61213
       
    At3g55190  
No Matches Found
       
    At5g11650 **11 - 5
Contig04610
Contig41110
Contig41108
Contig41109
Contig06181
       
    At5g16120 **12 - 6
Contig18917
Contig70669
Contig60828
Contig18326
Contig64541
Contig18085
       
                 
  Peroxisomal Enoyl-CoA Hydratase At2g30660 ** 1 - 4
Contig05127
Contig21912
Contig06174
Contig20465
       
    At1g60550 ** 2 - 4
Contig74852
Contig44630
Contig44627
Contig44629
       
                 
  Hydroxyacyl-CoA Dehydrogenase At3g15290 ** 1 - 5
Contig06380
Contig30413
Contig71394
Contig56382
Contig30416
       
                 
  Ketoacyl-CoA Thiolase At2g33150 ** 1 - 3
Contig34339
Contig13855
Contig44559
       
    At5g48880a ** 2 - 10
Contig44559
Contig76824
Contig44558
Contig64242
Contig55718
Contig07219
Contig44557
Contig75852
Contig34339
Contig13855
       
    At5g48880b ** 3 - 10
Contig44559
Contig76824
Contig44558
Contig64242
Contig55718
Contig07219
Contig44557
Contig75852
Contig34339
Contig13855
       
    At1g04710 ** 4 - 5
Contig13855
Contig34339
Contig44559
Contig76824
Contig44558
       
                 
  Peroxisomal Enoyl-CoA Hydratase of Multifunctional Protein At4g29010 ** 1 - 5
Contig41997
Contig41996
Contig41998
Contig56823
Contig07163
       
    At3g06860a ** 2 - 9
Contig04082
Contig69013
Contig69014
Contig28783
Contig78377
Contig78698
Contig76528
Contig63348
Contig63347
       
    At3g06860b ** 3 - 7
Contig04082
Contig69013
Contig69014
Contig28783
Contig78377
Contig78698
Contig76528
       
                 
  Enoyl-CoA Isomerase of Multifunctional Protein At4g29010 ** 1 - 8
Contig41997
Contig41996
Contig41998
Contig56823
Contig07163
Contig21851
Contig07164
Contig77851
       
    At3g06860-supported_by_cDNA_gi:17065089 ** 2 - 9
Contig04082
Contig69013
Contig69014
Contig28783
Contig78377
Contig78698
Contig76528
Contig63348
Contig63347
       
    At3g06860-supported_by_cDNA_gi:17065147 ** 3 - 7
Contig04082
Contig69013
Contig69014
Contig28783
Contig78377
Contig78698
Contig76528
       
                 
  Hydroxyacyl-CoA Epimerase of Multifunctional Protein
Recheck...
           
                 
                 
  Dienoyl-CoA Reductase At3g12800 ** 1 - 5
Contig70759
Contig29625
Contig29626
Contig54574
Contig29627
       
                 
  Hydroxyisobutyryl-CoA Hydrolase At5g65940 ** 1 - 8
Contig74998
Contig65826
Contig50789
Contig50790
Contig12021
Contig12020
Contig41613
Contig41614
       
    At2g30660 ** 2 - 8
Contig74998
Contig65826
Contig50789
Contig50790
Contig12021
Contig41614
Contig41613
Contig12020
       
    At2g30650 ** 3 - 8
Contig74998
Contig65826
Contig50789
Contig50790
Contig12021
Contig41614
Contig41613
Contig12020
       
       
       
  Fatty Acid ω-Alcohol Oxidase At3g23410 ** 1 - 9
Contig78587
Contig76094
Contig71208
Contig19702
Contig71209
Contig06307
Contig51802
Contig19464
Contig19409
       
    At4g19380 ** 2 - 6
Contig22454
Contig21748
Contig21250
Contig58880
Contig22036
Contig50544
       
    At4g28570 ** 3 - 5
Contig19266
Contig17633
Contig19265
Contig01462
Contig06422
       
    At1g03990 ** 4 - 1
Contig06422
       
                 
  Peroxisomal Long-Chain Acyl-CoA Synthetase At5g27600 ** 1 - 7
Contig48005
Contig57809
Contig22109
Contig19920
Contig19361
Contig65021
Contig71913
       
    At3g05970 ** 2 - 11
Contig75230
Contig70176
Contig78857
Contig78344
Contig11407
Contig22109
Contig48005
Contig57809
Contig19920
Contig19361
Contig65021
       
                 
  Peroxisomal Fatty Acid / Acyl-CoA Transporter At4g39850a ** 1 - 4
Contig37469
Contig10164
Contig10361
Contig37468
       
   
At4g39850b
** 2 - 4
Contig10164
Contig37469
Contig10361
Contig37468
       
                 
  Acyl-CoA Dehydrogenase At3g06810 ** 1 - 7
Contig77309
Contig33778
Contig77406
Contig77405
Contig59319
Contig46820
Contig33777
       
                 
Lipid Signaling
  Diacylglycerol Kinase              
                 
                 
  Phosphatidylinositol-3-Kinase              
                 
                 
  Phosphatidylinositol-4-Kinase a              
                 
                 
  Phosphatidylinositol-4-Kinase b              
                 
                 
  Phosphatidylinositol-4-Kinase g              
                 
                 
  Phosphatidylinositol-Phosphate Kinase type IA              
                 
                 
  Phosphatidylinositol-Phosphate Kinase type IB              
                 
                 
                 
                 
  Phosphatidylinositol-Phosphate Kinase type III              
                 
                 
                 
                 
  Phosphoinositide-specific Phospholipase C              
                 
                 
                 
  Non specific Phospholipase C              
                 
                 
  Glycosylphosphatidylinositol-specific Phospholipase C              
                 
                 
  Phospholipase D a              
                 
                 
  Phospholipase D b (PLD b)              
                 
                 
  Phospholipase D g (PLD g)              
                 
                 
  Phospholipase D d (PLD d)              
                 
                 
  Phospholipase D z (PLD z)              
                 
                 
  Phospholipase A1              
                 
                 
  Secretory Phospholipase A2 (PLA2)              
                 
                 
  Cytosolic Phospholipase A2              
                 
                 
  Lysophospholipase (LysoPLA)              
                 
                 
  Galactolipase              
                 
                 
  DAD1-like Acylhydrolase              
                 
                 
  Cytosolic Lipoxygenase              
                 
                 
  Plastidial Lipoxygenase              
                 
                 
  Allene Oxide Synthase (AOS)              
                 
                 
  Allene Oxide Cyclase              
                 
                 
  Oxo-Phytodienoic Acid Reductase (OPR)              
                 
                 
  Hydroperoxide Lyase (HPL)              
                 
                 
  Fatty Acid Amide Hydrolase              
                 
                 
  N-Acylphosphatidylethanolamine Synthase              
                 
                 
  a-Dioxygenase-Peroxidase (involved in fatty acid a-oxidation)              
                 
                 
  NAD+ Oxidoreductase (involved in fatty acid a-oxidation)              
                 
                 
  PTEN-like Phosphoinositide 3-Phosphatase              
                 
                 
  Myotubularin-like Phosphoinositide 3-Phosphatase              
                 
                 
  Type II Phosphoinositide 5-Phosphatase              
                 
                 
  Sac domain-containing Phosphoinositide Phosphatase              
                 
                 
  Phosphoinositide 4-Phosphatase              
                 
                 
  Patatin-like Acyl-Hydrolase              
                 
                 
  Sulfolipase              
                 
                 
  Peroxygenase              
                 
                 
  Hydroperoxide Reductase              
                 
                 
  Epoxy Alcohol Synthase              
                 
                 
  Diacylglycerol-Pyrophosphate Phosphatase              
                 
                 
  Diacylglycerol-Phosphate Kinase              
                 
                 
  Long Chain Base / Ceramide Kinase              
                 
                 
  Long Chain Base 1-Phosphate Phosphatase              
                 
                 
  Long Chain Base 1-Phosphate Lyase              
                 
                 
  Lysophosphatidate Phosphatase              
                 
                 
  Jasmonic Acid Carboxyl Methyltransferase              
                 
                 
  Phospholipase A2 Activating Protein              
                 
                 
                 
                 
Fatty Acid Elongation and Wax and Cutin Metabolism
  Ketoacyl-CoA Synthase (KCS)              
                 
  Ketoacyl-CoA Reductase              
                 
                 
  Hydroxyacyl-CoA Dehydrase              
                 
                 
  Enoyl-CoA Reductase              
                 
                 
  Alcohol-forming Fatty Acyl-CoA Reductase              
                 
                 
  Wax Synthase              
                 
                 
  Aldehyde Decarbonylase              
                 
                 
  CER2 Protein              
                 
                 
  CER3 Protein              
                 
                 
  Wax Ester Hydrolase              
                 
                 
  Fatty Acid w-Hydroxylase              
                 
                 
  Aldehyde-forming Fatty Acyl-CoA Reductase              
                 
                 
  Secondary Alcohol-forming Hydroxylase              
                 
                 
  Ketone-forming Oxidase              
                 
                 
  ELO-like Elongase              
                 
                 
  Bifunctional Wax Ester Synthase / Diacylglycerol Acyltransferase              
                 
                 
                 
Miscellaneous
  Lipid Transfer Protein type 1 (LTP1)              
                 
                 
  Lipid Transfer Protein type 2 (LTP2)              
                 
                 
  Lipid Transfer Protein type 3 (LTP3)              
                 
                 
  Lipid Transfer Protein type 4 (LTP4)              
                 
                 
  Lipid Transfer Protein type 5 (LTP5)              
                 
                 
  Lipid Transfer Protein type 6 (LTP6)              
                 
                 
  Lipid Transfer Protein type 7 (LTP7)              
                 
                 
  Lipid Transfer Protein type 8 (LTP8)              
                 
                 
  Acyl-CoA Desaturase-like              
                 
                 
  ATP Citrate Lyase A subunit              
                 
                 
  ATP Citrate Lyase B subunit              
                 
                 
  Pollen-surface Oleosin              
                 
                 
  Acyl-CoA Thioesterase              
                 
                 
  Malonyl-CoA Decarboxylase              
                 
                 
  Acyl-CoA Binding Protein (ACBP)              
                 
                 
  Sec14-like Protein              
                 
                 
  Plastid Lipid-associated Protein              
                 
                 
  Plastidial Long-Chain Acyl-CoA Synthetase              
                 
                 
  Long-Chain Acyl-CoA Synthetase              
                 
                 
  Plastidial ABC Acyl Transporter              
                 
                 
  Epoxide Hydrolase              
                 
                 
  Acetyl-CoA Synthetase (AMP forming)              
                 
                 
  Cytosolic Holo-ACP Synthase              
                 
                 
  Cytosolic Homomeric Acetyl-CoA Carboxylase              
                 
                 
  Sphingosine Transfer Protein              
                 
                 
  Protein N-Myristoyltransferase              
                 
                 
  Lipid Acylhydrolase-like              
                 
                 
  Cyclopropane Fatty Acid Synthase              
                 
                 
  PPT1-like Thioesterase              
                 
                 
  Glycerophosphoryl Diester Phosphodiesterase              
                 
                 
  Phospholipid : Acyl acceptor Acyltransferase