Acyl-ACP Thioesterase Fat A
Acyl-ACP Thioesterase Fat A[partical sequence]
Protein 1
Camelina Protein Sequences
>contig03899 length=1244 numreads=75
PITHKTLLIIFPKITKPILSLPRNVEAFV*CN*PLTQLFLLRFSPAFCSGASPYRTRLLFSDKEGTFTGNSLSRSRKQQPPCCRFCFRCSSGGSSPIWSVDGRWVV*GEVHC*KL*SWD*QNCHR*DNC*SLAGSGM*SCSESWIFD*WVCYNTYYEELHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDCATGEVIGRATSKWVMMNQDTRRLQRVTDEVRDEYLVFCPREPRLAFPEENNSSLKKIPKLEDPAQYSMLGLKPRRADLDMNQHVNNVTYIGWVLESIPQEIIDTHELQVITLDYRRECQQDDIVDSLTTFEIPTRRSQSLLGPTDLPVKQTEHNESQFLHILRLSENGQEINRGRTQWRNKSSR*VLFTSLVSVKLICFTFVVVCIL*S
Camelina Nucleotide Sequence
>contig03899 length=1244 numreads=75 [matches to ORF]
cCTATAACACACAAAAcCCtTTTaAtcATAtTcCCtAAAATAACaAAACCCATCTCTCagTTTACCCAGAAATGTTGAAGCTTTCgTGTAATGTAACTGACCACTTACACagCtTTTTctTCTCCGATTCTCGCCGGCTTTTTGtTCCGGTGCATCGCCGTACCGGACCCGTCTCTTGTTTTCAGaTAAAGAAGGAACCtTTaCGGGCAATTctCTCAGCCGATCAAGGAAACAGCAGCCTCCGTGTTGcCGATTCTGtTTCCGATGCTCCTCCGGCGGATCGTCTCCGATTTGGTCGGtTGATGGAAGATgGGtCGTATAAGGAGAAGTTCATTGTTAGAAGCTATGAAGTTGGGATTAACAAAACTGCCACCGTTGAGACAATTGCTAATCTCTTGCAGGAAGTGGCATGTAATCATGTTCAGAAAGTTGGATTTTCGACTGATGGGTTTGCTACAACACTTACTATGAGGAAtTGCATCTCATTTGGGTTACTGCAAGAATGCATATTGAGATTTACAAGTATCCAGCTTGGAGTGATGTGGTTGAGATTGAGACTTGGTGTCAGAGTGAAGGAAGGATTGGAACTAGACGTGATTGGATTTTAAAGGACTGTGCTACCGGtGAAGTTATTGGACGTGCTACAAGcAAGTGGGTGATGATGAACCAAGACACAAgGCGGCTTCAAAGAGTTACAGATGAAGtTCGGGACGAGTACTTGGtTTTTTGTCCTCGAGAACCCAGACTAGCGTTTCCAGAGGAGAACAATAGCAGCTTAAAGAAAATCCCAAAACTGGAAGATCCAGCTCAGTATTCTATGCTTGGGCTTaAACCTAGACGAGCTGATCTAGACATGAACCAGCATGTAAATAATGTCACCTACATTGGGTGGGTCCTTGAGAGCATACCTCAAGAAATTATAGACACGCACGAGCTTCAAGTGATTACTCTAGATTACAGAAGAGAATGCCAGCAAGATGAcATTGTAGATTcACtTACCACATtTGaaAtCCCAACGAgGCGGTCTCAAAGCtTaCtgGGACCAACGGATCTACCAgTCAAGCAAACAGAACACAATGAGAGCCAGTTCTTGCATATCtTGAGGTTGTCAGAAAATGGTCAGGAGATCAATCGTGGGAGAACCCAGTGGAGaaAcaAGTcCtCAAGAtGAGtTCtTTTCACTTCTCTTGTCTCAGTgaAGTTaatTTGCTTcACaTTTgTAGtTGTtTGTATcCTcTGATCAG
>contig02829 length=310 numreads=20 [matches to Gene]
CTTCTAAtttTTTTTcCtaaAAAAAAAATaGTTGAAGCTTTCGTGTAATGTGACTGATTCTTCAAAGTTACAGAGAAGCTTACTCTTCTTCTCGCATTCTCATCGATCTGATCCGGTGAATTGCATCCGTCGTAGAATCGTCGCATCtTCCGTCTCTTGTTCTCAGACGAAGAAGACGGGTTTGGTGGATCCTTTGCGAGCGGTTGTATCTGCTGATCAAGGAAGTGTGATTCGAGCTGAACAAGGTTTGGGTACTCTCGCGGATCAGCTCCGATTAGGTAGTTTGACTGAAGATGGTTTGTCTTATAAA
Arabidopsis Orthologous Sequences
>gi|15230256|ref|NP_189147.1| AtFaTA (Arabidopsis FatA acyl-ACP thioesterase); acyl carrier/ acyl-[acyl-carrier-protein] hydrolase [Arabidopsis thaliana]
MLKLSCNVTDSKLQRSLLFFSHSYRSDPVNFIRRRIVSCSQTKKTGLVPLRAVVSADQGSVVQGLATLADQLRLGSLTEDGLSYKEKFVVRSYEVGSNKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWGDVVEIETWCQSEGRIGTRRDWILKDSVTGEVTGRATSKWVMMNQDTRRLQKVSDDVRDEYLVFCPQEPRLAFPEENNRSLKKIPKLEDPAQYSMIGLKPRRADLDMNQHVNNVTYIGWVLESIPQEIVDTHELQVITLDYRRECQQDDVVDSLTTTTSEIGGTNGSATSGTQGHNDSQFLHLLRLSGDGQEINRGTTLWRKKPSS
>gi|15235555|ref|NP_193041.1| acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl-(acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative [Arabidopsis thaliana]
MLKLSCNVTDHIHNLFSNSRRIFVPVHRQTRPISCFQLKKEPLRAILSADHGNSSVRVADTVSGTSPADRLRFGRLMEDGFSYKEKFIVRSYEVGINKTATIETIANLLQEVACNHVQNVGFSTDGFATTLTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDCATGEVIGRATSKWVMMNQDTRRLQRVTDEVRDEYLVFCPPEPRLAFPEENNSSLKKIPKLEDPAQYSMLGLKPRRADLDMNQHVNNVTYIGWVLESIPQEIIDTHELKVITLDYRRECQQDDIVDSLTTSETPNEVVSKLTGTNGSTTSSKREHNESHFLHILRLSENGQEINRGRTQWRKKSSR
Matching Arabidopsis Sequences from
Arabidopsis Lipid Metabolism Website
(Open Reading Frame and Gene)
>At3g25110-Gene
gtggtttagaagtagatactaaaatgtgtgagttgttatgaaattatacactaatagtgatgcgtaatagaatgagcaacaacaacaaaaaaatctcaacaacaacaacaatacatgtggaggagaagaaaaagtcttcgctcttcaaaaaaaaacaattgcaaaaaaaataaagtcacgtgattaaaccgagaagacagggaagacacgtgcttggctacattacaaaaacagagcacaccacaacaaacaacaacactagccaggctttttttaacattcgtctttgacaattgtccatcatcaatggcattaaatggcaaaaccgtaatttcgaactccaccaaggggcaaacttaaaagtcgatgtctttcttcttcacctcggacccatcggagagaagatactactagaagagattcattcacagtgttgaaattaaaaaaccgaaactttctcgtttcttcttcttcttctccaattttcaaaattcgaaaagATGTTGAAGCTTTCGTGTAATGTGACTGATTCTAAGTTACAGAGAAGCTTACTCTTCTTCTCCCATTCATATCGATCTGATCCGGTGAATTTCATCCGTCGGAGAATTGTCTCTTGTTCTCAGACGAAGAAGACAGGTTTGGTTCCTTTGCGTGCTGTTGTATCTGCTGATCAAGGAAGTGTGGTTCAAGGTTTGGCTACTCTCGCGGATCAGCTCCGATTAGGTAGTTTGACTGAAGATGGTTTATCTTATAAAGAGAAGTTTGTTGTTAGATCTTACGAAGTGGGTAGTAACAAAACCGCTACTGTTGAAACCATTGCTAATCTTTTACAGgtcagatacaaatttttcacgttgtgtgtgtgtgtgtgtgtcttgatgattggttttgttgtaaagtatgaatctttttgtggtgaattgttgtgtatagGAGGTGGGATGTAATCATGCACAAAGTGTTGGTTTTTCGACTGATGGGTTTGCAACAACAACTACTATGAGGAAGTTGCATCTCATTTGGGTTACTGCGAGAATGCATATCGAGATCTATAAGTACCCTGCTTGgtaatttttgcttttgcttgtttatgtatttgtttgtgttttgacaatagtgtgagtagggagttttgaatacttttagcttgtttgtttggttactactacagGGGTGATGTGGTTGAGATAGAGACTTGGTGTCAGAGTGAAGGAAGGATTGGGACAAGGCGTGATTGGATTCTTAAGGATTCTGTCACTGGTGAAGTCACTGGCCGTGCTACAAGgtaggagatatatagcaaagttttggactttctgcattggttagggacatggatataggagttggttacatgttttgtgttgcggtaacttggatttatgggcctgttctgatttgttgtgtggcaattttgttatggtttcagCAAGTGGGTGATGATGAACCAAGACACGAGACGGCTTCAGAAAGTTTCTGATGATGTTCGGGACGAGTACTTGGTCTTCTGTCCTCAAGAACCGAGgtaaaggacactttggtatcagggcaaagcttgctggtcaatgaatgctaagtatgtttctttctatgtatcttatagGTTAGCATTTCCGGAAGAGAATAACAGAAGCTTGAAGAAAATCCCGAAACTCGAAGATCCGGCTCAGTATTCAATGATTGGGCTTAAGgtacaaacaatagcattattagaactctttctccaactttaggcttcaaaatatcttaaaggctttgtgaacatgtttttgcagCCTAGACGAGCTGATCTCGACATGAACCAGCATGTCAATAATGTCACCTATATTGGATGGGTTCTCGAGgtaagtcactaggtttattagtaaagctcaatgtgcttgtatgtgaactttagtaatcatatgatcttgtttcctggtaattgcagAGCATACCACAAGAAATTGTAGACACGCACGAGCTTCAGGTCATAACTCTGGATTATAGAAGAGAATGTCAACAAGACGATGTGGTGGATTCACTCACCACCACCACCTCTGAAATTGGTGGAACCAATGGCTCTGCCACGTCTGGCACACAGGGCCACAACGATAGCCAGTTCTTGCACCTCCTGAGGTTGTCTGGAGATGGTCAGGAGATCAACCGCGGGACAACTCTGTGGAGAAAGAAGCCTTCAAGTTAAgaaatagacaatgtctttagccattttgttctcaagtttccatcatctcaatgaagatttcgcttcacgagtctgagcaggtctccatttttttctctttcaagtttgggttagactagagggaactggattgttggagtattaatctttgttgaatttcattatgtttgttcatgtttttgtacaaattttggggatttagccaaacccatatcgtctttggtcttgtcttgtgcctgcgtgtatttttaatctatccgttcaaaacacagattgttcattagatgttttatataaacagagttaaagacctgaagaggtaaagagttaacaccaaatgagtaaaggaccttttcacataaaactctatggttatttgattaaacaagttacatgattgataacagattgtgcctattacacaggctcgtaaaaaatgcaaacagtgagataaaactgaaaactataaaagaaaacacactgaatcgaagaacaatgag
>At3g25110-ORF
ATGTTGAAGCTTTCGTGTAATGTGACTGATTCTAAGTTACAGAGAAGCTTACTCTTCTTCTCCCATTCATATCGATCTGATCCGGTGAATTTCATCCGTCGGAGAATTGTCTCTTGTTCTCAGACGAAGAAGACAGGTTTGGTTCCTTTGCGTGCTGTTGTATCTGCTGATCAAGGAAGTGTGGTTCAAGGTTTGGCTACTCTCGCGGATCAGCTCCGATTAGGTAGTTTGACTGAAGATGGTTTATCTTATAAAGAGAAGTTTGTTGTTAGATCTTACGAAGTGGGTAGTAACAAAACCGCTACTGTTGAAACCATTGCTAATCTTTTACAGGAGGTGGGATGTAATCATGCACAAAGTGTTGGTTTTTCGACTGATGGGTTTGCAACAACAACTACTATGAGGAAGTTGCATCTCATTTGGGTTACTGCGAGAATGCATATCGAGATCTATAAGTACCCTGCTTGGGGTGATGTGGTTGAGATAGAGACTTGGTGTCAGAGTGAAGGAAGGATTGGGACAAGGCGTGATTGGATTCTTAAGGATTCTGTCACTGGTGAAGTCACTGGCCGTGCTACAAGCAAGTGGGTGATGATGAACCAAGACACGAGACGGCTTCAGAAAGTTTCTGATGATGTTCGGGACGAGTACTTGGTCTTCTGTCCTCAAGAACCGAGGTTAGCATTTCCGGAAGAGAATAACAGAAGCTTGAAGAAAATCCCGAAACTCGAAGATCCGGCTCAGTATTCAATGATTGGGCTTAAGCCTAGACGAGCTGATCTCGACATGAACCAGCATGTCAATAATGTCACCTATATTGGATGGGTTCTCGAGAGCATACCACAAGAAATTGTAGACACGCACGAGCTTCAGGTCATAACTCTGGATTATAGAAGAGAATGTCAACAAGACGATGTGGTGGATTCACTCACCACCACCACCTCTGAAATTGGTGGAACCAATGGCTCTGCCACGTCTGGCACACAGGGCCACAACGATAGCCAGTTCTTGCACCTCCTGAGGTTGTCTGGAGATGGTCAGGAGATCAACCGCGGGACAACTCTGTGGAGAAAGAAGCCT
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nucleotide
ORF,
GENE,
or
protein
sequences.
last updated by Jason Macrander 6/9/2010