Stearoyl-ACP Desaturase [partical sequence]
Stearoyl-ACP Desaturase[partical sequence]
Protein 1 - stearoyl-ACP desaturase (Fab 2)
Camelina Protein Sequences
>contig10744 length=937 numreads=62
EENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTARQAKEHGDFKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVMAFADMMRKKISMPAHLMYDGRNDNLFDNFSSVAQRLGVYTAKDYADILEFLVGRWKIGGLTGLR*RKQSTRLSMRVVSKNQEIG*ESSSKSQERTQDSFQLDT*QRSAALKRTQTKEPSLRSRLLISSVCF*NWCRLLWFLIMFVGLLVYKVEKQ*F*YLCFSQSHYMFWVIGPFLVHFCSS*KQLKSGLYSVFSVEFCL
Camelina Nucleotide Sequence (two differnt portions of the same gene)
>contig10744 length=937 numreads=62
GAGGAAAACCGACATGGTGATCTTCTGAACAAATACCTTTACTTGTCTGGTCGTGTTGACATGAGGCAGATCGAAAAGACCATTCAGTACTTGATTGGATCCGGAATGGATCCGCGGACAGAGAATAACCCcTACCTTGGCTTCATCTATACTTCATTCCAAGAAAGAGCGACCTTCATCTCTCACGGAAACACAGCCCGCCAAGCCAAAGAGCATGGtGACTTCAAACTAGCCCAAATATGTGGCACAATAGCTGCAGACGAGAAGCGTCAcGAAACaGCATACACgAAGATAGTTGAGAAGCTCTTtGAGATTGATCCTGATGGTACAGTCATGGCTTTTGCAGACATGATGAGAAAGAAAATCTCAATGCCTGCTCACTTGATGTACGATGGGCGCAACGACAACCTCTTTGACAACTTCTCATCCGTGGCTCAGAGGCTCGGTGTTTACACTGCGAAAGACTACGCAGACATTCTTGAGTTTTTGGTTGGTAGGTGGAAAATTGGGGgcTTAActGGGCtCAGGTGAAGGAAACAAAGCACAAGACTATCTATGCGGGTTGTCTCCAAGAATCAAGAGATTGGATGAGAGAGCTCAAGCAAGAGCCAAGAAAGGACCCAAGATTCCTTTCaGCTGGATACATGACAGAGAAGTGCAGCTCTAAAAAGGACacAGACAAAAgAACCCtCTCTCcgcTCTCGGTTACTCATTTCATCAGTCTGCTTTtGAAATTGGTGTAGATTACTATGGTTTCTGATAATGTTcGTcGgTCTACTAGTTTACAAAGTTGAGAAGCAGTGATTTTAGTATCTTTGTTTTtCCCAGTCAcaCTATATGTTTtGGGTCATTGGTCCCTTcTTAGTACACTTTTGTAGTaGTTAAAAaCaGTTGAAGtCTGGTCTGTACTCAGttttttCtgTGGAGTTTtGTTTGC
Arabidopsis Orthologous Sequences
>gi|15224342|ref|NP_181899.1| SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase [Arabidopsis thaliana]
MALKFNPLVASQPYKFPSSTRPPTPSFRSPKFLCLASSSPALSSGPKEVESLKKPFTPPREVHVQVLHSMPPQKIEIFKSMENWAEENLLIHLKDVEKSWQPQDFLPDPASDGFEDQVRELRERARELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVMAFADMMRKKISMPAHLMYDGRNDNLFDNFSSVAQRLGVYTAKDYADILEFLVGRWKIQDLTGLSGEGNKAQDYLCGLAPRIKRLDERAQARAKKGPKIPFSWIHDREVQL
Matching Arabidopsis Sequences from
Arabidopsis Lipid Metabolism Website
(Open Reading Frame and Gene)
>At2g43710-Gene
"caacaattcttttcaagatgtatcccttttttttcttgcaactttttctcaactatattaatatttagtatactgctacttagctactcgatgttttgatgtatcattgatcattattgttgactaataattatttgatacaaatattttaccgacatatgtaagaacaatagtgtcaaaattgaagcatctcaagggtattttagaacagatacccaatttatttatttttataatttgtcaccttgtttttcacacacaaatgacaatatgacgtcattttccttattagaataatttttttaacaaaaaaaagaattatttattttcgtctctcttattgcttgctacgctcaacgctgtgcataagcattctctttctgtggacgaaactaaacctgagagaaaaagccagaagaaccaaactcagaccgagagatagagattgagggagagctctagctctgtagaaaagaaggattcattcatcatatccagaaATGGCTCTAAAGTTTAACCCTTTGGTGGCATCTCAGCCTTACAAATTCCCTTCCTCGACTCGTCCGCCAACTCCTTCTTTCAGATCTCCCAAGTTCCTCTGCCTCGCTTCTTCTTCTCCGGCTCTCAGCTCCGGCCCCAAgtcagtctctttctctccatcatcgtctctcttatctactttcgattctctctgtttcatctttgtttactgtgttctgggttttgcttgttcttatcgatattggatctacgttttctcgattttgttcagtgttatttgcttacatttgcttaatctcgagtgtgatttcaataaaagtacgttcttttaatctgggtttataagaatgggccatcctctgttctcaggtgattcattaatgctctttttcattgaatctgatgtttgttgattgttccctattattctcacgtttctctgagattgccccatctatcaaatcgttgcctttaccatatttattctgcatcagattatgtagattgctcgttgattggttgttagttaagattaacactagttatcttctttatggtataatgatctttagattggttaagacttaacagacattgaggaaagcttcttagtcaaagagaaagttttgttttgttttctctggtttagtaatttttaatggtgaaatgtttatccacttgtttcttactcatttgatgagttttctcttttgtattgacaagagattcttgaacgtatcagtttacgtctgtttatctttcttcaaagacattacgttggatatcacgcttcgtggcctttctctatgcatgcgtacttcgtggcttctctctttagtttgcgtccaaaattttcacacttttctgtaatttattattcattctttctctgttttgaagacatttggctctttatcttgtctttgtctgatcagtagtcactacatttgtttctttcacaatctttcttttttgcttcatattgaactgcaagaccaatccatgaatgcaaatataaaatattgtcttacggttaaccatctctaagtgtttgctagtcatgaattgtgaaattgtttcgcttcaaacatagaattagttgatttggaaatgtagacatgaatgcttatctaaatacaataaactgtgttcttgtttcagttgtgtatcagagatgagaccttgactggtaatttcaatggagcataattaaatgctaatgatacttattttctggttaatgcagGGAGGTTGAGAGTTTGAAGAAACCATTTACGCCACCCAGGGAAGTGCATGTTCAAGTCTTGCACTCCATGCCACCTCAAAAGATCGAGATCTTCAAATCTATGGAAAACTGGGCCGAGGAGAACCTTCTGATTCACCTCAAGGATGTGGAGAAGTCTTGGCAACCCCAGGATTTCTTGCCTGACCCTGCATCAGATGGGTTTGAAGATCAGGTAAGAGAGTTAAGAGAGAGGGCTAGAGAGCTCCCTGATGATTACTTTGTTGTTTTGGTGGGGGACATGATCACAGAAGAAGCACTTCCGACCTATCAAACTATGTTGAACACTTTGGATGGAGTTAGGGATGAAACAGGTGCTAGTCCTACTTCATGGGCTATTTGGACCAGAGCTTGGACTGCAGAAGAAAACCGACATGGCGATCTTCTGAATAAATACCTTTACTTGTCTGGTCGTGTTGACATGAGGCAGATCGAAAAGACCATTCAGTACTTGATTGGATCTGGAATGgtgagatagtttcaggcaattatcatgatttcttggttaatataactacctaatcgctttaacttatctttcatagGATCCGCGGACAGAGAATAACCCCTACCTTGGCTTCATCTATACGTCATTCCAAGAAAGAGCGACATTCATCTCTCACGGAAACACAGCCCGCCAAGCCAAAGAGCACGGGGACATCAAACTAGCCCAAATATGTGGCACAATAGCTGCAGACGAGAAGCGTCATGAAACAGCATACACCAAGATAGTTGAAAAGCTCTTTGAGATTGATCCTGATGGTACTGTCATGGCTTTTGCAGACATGATGAGAAAGAAAATCTCAATGCCTGCTCACTTGATGTATGATGGGCGCAACGACAACCTCTTTGACAACTTCTCTTCCGTGGCTCAGAGGCTCGGTGTTTACACCGCCAAAGACTATGCAGACATTCTTGAGTTTCTGGTTGGTAGGTGGAAAATCCAGGACTTAACCGGGCTTTCAGGTGAAGGAAACAAAGCACAAGACTATTTATGCGGGTTGGCTCCAAGGATCAAGAGATTGGATGAGAGAGCTCAAGCAAGAGCCAAGAAAGGACCCAAGATTCCTTTCAGTTGGATACACGACAGAGAAGTGCAGCTCTAAaaggacaaagacaaaaacaaaaacctatcctcccggttcctcatttcatctgtctgctcttaaaattggtgtagattactatggttttctgataatgttggtgggtctagttacaaagttgagatgcagtgatttagtagctttgtttttcccagtcactatatgtttggtctttggtccgttagcacacttgtagtagttaaaacagtttaagtatggtctgtactcagtcttcctcttctctgtggagttttgtttaagttcaggttagttttgttttgtctctctgttttttcccctgtttctcgacaaacaactcatgtggctttttagcaattttgatggatgatcatgatgaataattgaatatcttcaatgtcagtttacatttaactaattggtcaatgtttgacgatcatgcttaatgcttatctctataaattaatgtaaagtcaataataatgaaaccctSequencesof'leader,'trailer,andintrons(whenapplicable)areprintedinlowercase."
>At2g43710-ORF
ATGGCTCTAAAGTTTAACCCTTTGGTGGCATCTCAGCCTTACAAATTCCCTTCCTCGACTCGTCCGCCAACTCCTTCTTTCAGATCTCCCAAGTTCCTCTGCCTCGCTTCTTCTTCTCCGGCTCTCAGCTCCGGCCCCAAGGAGGTTGAGAGTTTGAAGAAACCATTTACGCCACCCAGGGAAGTGCATGTTCAAGTCTTGCACTCCATGCCACCTCAAAAGATCGAGATCTTCAAATCTATGGAAAACTGGGCCGAGGAGAACCTTCTGATTCACCTCAAGGATGTGGAGAAGTCTTGGCAACCCCAGGATTTCTTGCCTGACCCTGCATCAGATGGGTTTGAAGATCAGGTAAGAGAGTTAAGAGAGAGGGCTAGAGAGCTCCCTGATGATTACTTTGTTGTTTTGGTGGGGGACATGATCACAGAAGAAGCACTTCCGACCTATCAAACTATGTTGAACACTTTGGATGGAGTTAGGGATGAAACAGGTGCTAGTCCTACTTCATGGGCTATTTGGACCAGAGCTTGGACTGCAGAAGAAAACCGACATGGCGATCTTCTGAATAAATACCTTTACTTGTCTGGTCGTGTTGACATGAGGCAGATCGAAAAGACCATTCAGTACTTGATTGGATCTGGAATGGATCCGCGGACAGAGAATAACCCCTACCTTGGCTTCATCTATACGTCATTCCAAGAAAGAGCGACATTCATCTCTCACGGAAACACAGCCCGCCAAGCCAAAGAGCACGGGGACATCAAACTAGCCCAAATATGTGGCACAATAGCTGCAGACGAGAAGCGTCATGAAACAGCATACACCAAGATAGTTGAAAAGCTCTTTGAGATTGATCCTGATGGTACTGTCATGGCTTTTGCAGACATGATGAGAAAGAAAATCTCAATGCCTGCTCACTTGATGTATGATGGGCGCAACGACAACCTCTTTGACAACTTCTCTTCCGTGGCTCAGAGGCTCGGTGTTTACACCGCCAAAGACTATGCAGACATTCTTGAGTTTCTGGTTGGTAGGTGGAAAATCCAGGACTTAACCGGGCTTTCAGGTGAAGGAAACAAAGCACAAGACTATTTATGCGGGTTGGCTCCAAGGATCAAGAGATTGGATGAGAGAGCTCAAGCAAGAGCCAAGAAAGGACCCAAGATTCCTTTCAGTTGGATACACGACAGAGAAGTGCAG
Right click here to download alligned
nucleotide
or
protein
sequences.
Protein 2 - putative stearoyl-acyl carrier protein desaturase
Camelina Protein Sequences
>contig24236 length=1188 numreads=77[matches Gene]
VCLVWLMGTKTMAMAMAMNRIAFSSPSSFYHRSSHHPHGSRSSRVFMASSTIRSISTEDTNGRKPYIPPREVHRQVKYSMPPQKLEIFKSLEGWAEENLLAYLKPVEKSWQPTDFLPEADSEGFYDQVKELRERCKELSDDYFVVLVGDMITEEALPTYQTMINTLDGVRDETGASPSPWAVWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPKTENNPYLGFIYTSFQERATFISHGNAARLAKNLGDLKLGKICGTIAADERRHETAYTKIVEKLFEIDPDTTIVGFADMMKKKISMPAHLMYDGRDDNLFDHFSSVAQRLGVYTARDYADILEFLVQRWNVQKLSDLSSEGHKAQDYLCGLPARIRKLEERAQGRTKEA
>contig11371 length=1379 numreads=127[matches ORF]
GYGSDRLLPFILRLSSLSS*GIQIF*SFHGFYDSLCRYRGYEWKETVYPS*RGACPS*TFYAARKVGDL*VFRRMG**NPLDLFKTC*EIWQPTDFLPEPESEGFYDQVKELRERCKELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQVEKTIQYLIGSGMDPKTENNPYLGFIYTSFQERATFISHGNTARLAKDRGDLKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTILGLADMMKKKISMPAHLMYDGQDDNLFEHFLNCCPEAWYLHSQGLC*YSGVSC*TVECGDFVRPF**RTQGPGLCLRTTYKNPQN*RESSRKSQRSSQKHTIQLDFW*KYQGLRSLVHNSLSNYPK*AIKVFTNHLILTNEGPVLRPRKFI*ICFVLYGTL*IKLCG*VMFLV*ISQD
Camelina Nucleotide Sequence
>contig24236 length=1188 numreads=77[matches Gene]
GtTTGTTTGGTTTGGCTAATGGGAACTaAAACAATGGCTATGGCTATGGCTATGAATCGGATCGCtTTTTCATCACCCTCATCATTTTATCATCGTTCTTCTCATCATCCTCATGGCTCTAGATCCTCCAGAGTTTTCATGGCTTCTTCCACTATCCGTTCCATTTCTACAGAGGATACGAATGGAAGAAAACCATATATCCCCCCTAGAGAGGTGCATCGTCAAGTGAAATATTCAATGCCACCACAGAAGCTGGAGATCTTTAAGTCCTTAGAAGGATGGGCTGAAGAGAACTTGTTGGCTTACCTAAAACCTGTTGAGAAATCATGGCAGCCTACTGATTTCCTCCCCGAAGCTGACTCAGAAGGCTTCTATGACCAAGTGAAAGAGCTAAGAGAAAGGTGTAAAGAGCTTTCTGATGACTACTTTGTAGTGCTTGTTGGTGATATGATCACAGAGGAAGCACTTCCGACTTATCAGACCATGATTAATACATTGGATGGGGTTAGAGATGAGACGGGAGCAAGTCCTTCCCCTTGGGCAGTATGGACTAGGGCATGGACTGCTGAAGAGAATAGACATGGTGATCTTCTTAACAAGTACCTTTATCTGTCTGGACGAGTAGACATGAGGCAGATTGAAAAGACAATTCAATACCTCATTGGTTCTGGAATGGATCCAAAAACTGAAAACAATCCTTACCTGGGTTTCATCTACACGTCTTTTCAAGAAAGAGCTACATTCATCTCCCATGGAAACGCTGCTAGACTAGCAAAGAATCTTGGAGACTTGAAACTTGGGAAGATTTGTGGCACCATTGCTGCTGATGAGAGGCGTCATGAAACAGCATACACCAAGATTGTAGAAAAGCTCTTCGAAATTGATCCTGACACCACAATCGTGGGTTTTGCTGACATGATGAAGAAAAAGATATCCATGCCTGCTCATTTGATGTATGATGGTCGTGATGATAATCTATTTGATCACTTCTCTTCCGTGGCACAGAGGCTTGGTGTCTACACTGCTAGGGACTATGCTGATATACTGGAATTTCTTGTGCAAAGGTGGAATGTGCAGAAGTTGTCAGACCTTTCTAGTGAAGGACACAAGGCCCAGGACTACCTCTGTGGATTACCTGCTAGGATCCGCaAACTTGaAGAGAGGGCACaAGGGAGaACCAAAGAAGCT
>contig11371 length=1379 numreads=127[matches ORF]
GgCTATGGATCGGATCGTCTTCTCCCCTTCATCTTACGTCTaTCGTCCTTGTCAAGTTAGGGGATCCAGATCTTCTAGAgTTTTCATGGCTTCTACGATTCGCTCTGCCGCTACaGAGGTTACGAATGGAAGGAAACTGTATATCCCTCCTAGAGAGGTGCATGTCCAAGTtAAACATTCtATGCCGCCAGAAAAGTTGGAGATCTTTAAGTCTTTAGAAGGATGGGCTGATGAaACCCTCTTGACTTATTTAAAaCCTGTTGAGAAATCTGGCAGCCGACTGATTTTCTTCCGGAACCTGAgTCGGAAGGaTTCTATGACCAAGTcAAGGAGTTGAGAGAAAGGTGTAAGGAACTTCCTGATGACTATTTTGTGGTGCTTGTTGGGGATATGATCACTGAAGAAGCACTTCCTACTTACCAGACcATGTTGAACACCTTGGATGGAGTTAGGGATGAGACaGGAGCAAGTCCTACTCcTTGGGCTATATGGACCAGGGCTTGGACTGCTGAGGAGAATAGACATGGGgATCTTCTTAACAAGTATCTTTATCTTTCTGGTCGaGTAGACATGAGGCAGGTTGAAAAGACAATTCAGTAtcTGATTGGTTCTGGAATGGATCCAAAAACTGAAAACAACCCGTACTTGGGTTTCATCTACACATCCTTTCAAGAAAGAGCGACCTTCATCTCTCATGGAAACACTGCCAGGCTAGCGAAAGATCGTGGAGATCTGAAACTTGCGCAGATATGCGGGACCATTGCTGCTGATGAGAAGCGTCATGAGACTGCTTACACCAAGATTGTAGAGAAGCTCTTTGAAATTGACcCTGATGGCACGATCTTGGGtCTGGCTGATATGATGAAGAAAAAGATCTCAATGCCTGCACATTTAATGTATGATGGCCAAGATGATAACCTGTTTGAGCACTTtctCAACtGTTGCCCAGAGGCTTGGTATCTACACAGCCAAGGACTATGCTGATATTCTGGAGTTTCTTGTTGAACGGTGGAATGTGGAGACTTTGTCAGGCCTTTCTAGTGAAGGACACAGGGCCCAGGACTTTGTCTGCGGACTACCTACAAGAATCCGCAAAATTGAAGAGAGAGCTCAAGGAAGAGCCAAAGAAGCAgCCAAAAaCATACCATTCAGCTGGATTTTtGGtAGAAATATCAGGGCTTAAGAAGTTTAGTACACAaTtCTCTTTCGAATTATCCCAagTAAGCCATAAAGGTCTTCACcAACCATCTCATTCTCACCAATGAAGGACCAGTTTTAAGACCACGAAAGTTCATTTGAATATGTTTTGTTTtAtACGGAACaTTGTAGATAAaGTTaTGTGGTTAGGTAAtGTTtCTTGTTtGAaTCAGTCAAGACCA
Arabidopsis Orthologous Sequences
>gi|21593675|gb|AAM65642.1| stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana]
MVMAMDRIALFSSSSSSVYRHRSSHSHGSKSSRVFTIRSDSTAVGRKLYIPPREVHLQVKYSMPPQKLEIFKSLEGWANENLLAYLKPVEKSWQPTDFLPEPESEGFYDQVKELRERCKELSDDYLIVLVGDMITEEALPTYQTMINTLDGVRDETGASPTPWAVWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPKTENNPYLGFIYTSFQERATFISHGNTARLAKDLGDLTLGKICGTIAADERRHEHAYTKIVEKLFEIDPDTTVVGFADMMRKKISMPAHLMYDGRDDNLFDHFSSVAQRLGVYTAKDYADILQHLVERWNVEKLSDLSSEGNRAQDYLCGLPARIRKLEERAQGRTKEAAKNIPFSWIFGREVRA
>gi|15232943|ref|NP_186912.1| acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative [Arabidopsis thaliana]
MAMAMDRIVFSPSSYVYRPCQARGSRSSRVSMASTIRSATTEVTNGRKLYIPPREVHVQVKHSMPPQKLEIFKSLEGWADETLLTYLKPVEKSWQPTDFLPEPESEGFYDQVKELRERCKELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPKTENNPYLGFIYTSFQERATFISHGNTARLAKDRGDLKLAQICGTIAADERRHETAYTKIVEKLFEIDPDGTILGLADMMKKKISMPAHLMYDGQDDNLFEHFSTVAQRLGVYTAKDYADILEFLVERWNVETLTDLSSEGHRAQDFVCGLPARIRKIEERAQGRAKEAAKNIPFSWIFGRNIRA
Matching Arabidopsis Sequences from
Arabidopsis Lipid Metabolism Website
(Open Reading Frame and Gene)
>At3g02620-Gene
accataccatcaatgcgatgttttgtttagtgtaaaaccgaataattgtgtatccatatgaattatatatatatatatatatataaaattataacaaatttatgatcgactgtatataaaaatacaatatttaaatggcaatgcaaacggcaaggaattatattatttgcgtagacaattttatataattaaaattgtaagaaatttatgatcgaatgtatataaaaacaatatttcaagggcaatgcaaacggcaagaagttatattatttgcgtagagattttctgtctttgcgataacatgtttaatagatctttaagtctatgacaactcgtcatattgatcatagaagaataaataattacaactggctaggggtaacatgtataacactctatcttttgtcaactcactcactatatacatatatactcttctctcctcctaacgcagaggcacaagggcaataagaaaagagagagatagataaatgacgatgATGGCTCTGCTCTTGAACTCGACGATGACTGTGGCTATGAAGCAGAATCCCGCGACCGCGGTATCTTTTATGCAGACTACTTGTTTGGGATCTAGTTTTTCTCCTCCTCGTCATCTTCAAGTTTCgtgtgttgccactaacccgaggcgagtttttttctttttagatcttcaattcttcgcgttgatctcaatgtattgttaataactttttcactcattgggttttatatacttgcatattaacatatgttctataaattacaataagacacgaacctgatcaaaataacagtgttcttaattaacgatgaaaatgttacagCAAGACGTTTCGACCCATCAAAGAAGTATCAAACCAAGTGACACACACAATAACACAAGAGAAACTGGAGATCTTCAAATCAATGGAGAATTGGGCCCAAGAAAACTTATTATCTTACCTCAAACCCGTCGAAACTTCATGGCAACCACAAGACTTTTTGCCAGAAACCAAAGACGAAGACCGATTCTACGAACAAGTGAAAGAGCTAAGAGATCGAACAAAAGAGATCCCTGACGATTACTTTGTAGTTCTTGTCGGAGATATGATCACCGAAGAAGCATTACCGACTTATCAAACGGTTATGAACACTCTCGACGGAGCCAAAGACGAGACCGGTGTTAGTCTAACACCGTGGGCGGTTTGGCTTAGAGCATGGACGGCGGAGGAAAATCGACACGGTGATTTGTTGAATAAGTACCTTTACTTATCAGGTCGTGTTGATACGCGACATGTTGAAAAGACTATTCAATATCTTATCGGATCCGGCATGgtacgttctttttggtattggccaaattgttacactcccataaatataggtgtgctcaaaatgtaaattataatttctttgggaccatattgacaagtttataattatttttcagGACACCAAATATGAGAACAATCCCTACAACGGCTACATCTACACTTCTTTTCAAGAGAGAGCAACTTTTATCTCCCACGCCAACACGGCGAAGCTAGCCACGACATACGGCGACACAACTCTCGCCAAAATCTGTGGAACAATCGCGGCGGATGAGAAGCGGCACGAGATGGCGTATACGCGGATCGTCGAGAAGCTATTCGAGATTGATCCCGATGGTACCGTACAAGCTCTAGCGAGTATGATGAGGAAGCGAATCACGATGCCGGCTCAGCTGATGCACGACGGTCGCGATGACAATCTGTTCGATCATTACGCTGCTGTGGCGCAGAGAATCGGAGTGTATACCGCGACGGATTACGCAGGGATTTTGGAGTTTTTGTTGCGGCGGTGGGAGGTGGAGAAGTTAGGGATGGGTTTGTCCGGTGAAGGAAGGAGAGCACAGGATTATCTGTGTACCTTGCCGCAGAGGATCAGGAGGTTAGAGGAAAGAGCTGACGATAGAGTCAAACGTGCGTCAAAGTCTAAACCTTCTGTTTCGTTCAGCTGGATTTACGGGAGAGAAGTTGAACTCTAAacgacaatggttgttgcgtttcactgtattagactcttaaacgttatgggccttactaatgtaatatgggaagtaaatgtaataaagaaacgctaaaagatcttgcgttttagtgaaacactgggttataactaccatatggcccatgggcttgaaaattaagcaaagaaaatatctgagtggcatagacgtaattaaaagagtagctgagggatattgtagagaagaaaaaagttgtatattaatgtccccttggctcgatcatcacgcccaaagtttcttcttcaccttgtctcttttcacagtctcacacagcatagaaataatcgaaagatttctttttaaaatctgggatttgttttttttgttcattgatcattttcgattgttagagaagaatcaaatggcgatggctatggatcggatcgtcttctccccttcatcttacgtctatcgtccttgtcaagctaggggatccagatcttccagagtttccatgggttagaggaaagagctgacgatagagtcaaacgtgcgtcaaagtctaaaccttctgtttcgttcagctggatttacgggagagaagttgaactctaaacgacaatggttgttgcgtttcactgtattagactcttaaacgttatgggccttactaatgtaatatgggaagtaaatgtaataaagaaacgctaaaagatcttgcgttttagtgaaacactgggttataactaccatatggcccatgggcttgaaaattaagcaaagaaaatatctgagtggcatagacgtaattaaaagagtagctgagggatattgtagagaagaaaaaagttgtatattaatgtccccttggctcgatcatcacgcccaaagtttcttcttcaccttgtctcttttcacagtctcacacagcatagaaataatcgaaagatttctttttaaaatctgggatttgttttttttgttcattgatcattttcgattgttagagaagaatcaaATGGCGATGGCTATGGATCGGATCGTCTTCTCCCCTTCATCTTACGTCTATCGTCCTTGTCAAGCTAGGGGATCCAGATCTTCCAGAGTTTCCATGGCTTCTACGATTCGCTCTGCGACTACgtgagttttaatctctctatttccaattcgtgagcttatttttctttaatgctttgaatttgttctgatctggagtttggtttgagtatcgatgataaacctctgggctttggttgatccagtttcttattttcatcaatttgattcccaatgcactctcattgtgtgtagttacgagttatatgatcacatgtattagtttctggtttgtgaaatgaggaatttgcttcatttgtgtttaaaaaatctttcatttttactggttttctgatttatctgggagatttctttagatcaaagaatcttgattttttttattttttatttatttgaaaagctatccttacatgcaaaggacaatctttgtctctatgttaaattttgataatctcttcaactttcccaaacgcatgcatgaattgttttgtgtttatgactttctttttacttggttgttgacccataagactactatgctaaatcattacttcgttcatttattctcttgtttgattattatgttaagaaagcttgttggtgtagtagctgcttagactttttctaaagctttatttggttttaattacagAGAGGTTACGAATGGAAGGAAACTGTATATCCCTCCCAGAGAGGTGCATGTCCAAGTCAAACATTCAATGCCGCCACAAAAGTTAGAGATCTTTAAGTCTTTAGAAGGATGGGCTGATGAAACCCTGTTGACTTATTTAAAACCTGTTGAGAAATCGTGGCAGCCTACCGATTTTCTTCCCGAACCTGAGTCGGAAGGATTCTATGACCAAGTCAAGGAGCTAAGGGAAAGGTGCAAGGAACTTCCTGATGACTATTTTGTGGTGCTTGTTGGGGATATGATCACTGAAGAAGCACTTCCTACTTACCAGACCATGTTGAACACATTGGATGGTGTTAGGGATGAGACAGGAGCTAGTCCTACTCCTTGGGCTATATGGACCAGGGCTTGGACTGCTGAGGAGAATAGACATGGGGATCTCCTTAACAAGTATCTTTATCTGTCTGGTCGGGTAGACATGAGGCAGATTGAAAAGACTATTCAGTACCTGATTGGTTCTGGAATGgtaagctctgctaactttcttttttgctttaacccataatctcctaaagttgcatttgcgctttaggaagtgactggggatggggatacaatcgttacatgcttgtttgaattgattgttaaaattccataggtaggggaacagaagaggaataagttggaaccatttatcagttttacttttttggaacttatcttgtcatttcttagtatggcttatattgacttcacaatgactatctgcaaatcttcatgttagcaacatacgcattttttatgtttcaagttctgaagatagaattggagtgctgcttagctgccacattaatcactttacggatttccattgtgtaaagtttgtattcctaatattcaatgtaagattgatcgatttgtcttatgtccttagGATCCAAAAACTGAAAACAACCCTTACTTGGGTTTCATCTACACATCATTTCAAGAAAGAGCGACCTTCATCTCCCATGGAAACACTGCCAGACTGGCGAAAGATCGTGGAGATTTGAAACTTGCGCAGATATGCGGGACCATTGCTGCTGATGAGAGGCGTCATGAGACTGCTTACACCAAGATTGTAGAGAAGCTCTTTGAAATTGACCCTGATGGCACGATCTTGGGCCTGGCTGATATGATGAAGAAAAAGATATCAATGCCTGCACATTTAATGTATGATGGCCAAGATGATAACCTGTTTGAGCACTTCTCAACCGTTGCCCAGAGGCTCGGTGTCTACACTGCCAAGGACTATGCTGATATTCTGGAGTTTCTTGTTGAACGGTGGAATGTGGAGACTTTGACAGACCTTTCTAGTGAAGGACACAGGGCCCAGgtaaattacctccatgaaacttcttgtgatgaaacctccaagtttatgaatacttataacaatcttgtagtagtttttggtcatgaatactatattagatatactgttttgtgtttttgatgatctgatcgggacctaaacttgaattctgactctatcatttcctttgacagGACTTTGTCTGCGGACTACCTGCAAGAATCCGTAAAATTGAAGAGAGAGCTCAAGGAAGAGCCAAAGAAGCTGCCAAAAACATACCATTCAGCTGGATATTTGGTCGAAATATCAGGGCTTAAgaagtttactacacaattctctttccaattatcccaagtaagtcataaaggtcttcaccaaccatttcaccaatgaaggaccagtttttaagaccacgaaagttcatttgaatgtgttttgttttatacggaacattgtagataaagttatgtggttaggttatgtttcttgtttgaatcagtcaagaccaaagaaaatgtgtttgagtgttcttagatattgtatggtttaccaagaacaagacttaagattttcctttacctttttgattctctttttgttgtatcagtctaaagaatgttctctcttaaataaagagtggtttggcaataatgttctagagaacttgggtacacatattccttgaatatcatcaattaaaattttcttatgcaagacatatagaatcatcaacaaagtaatcaaccaattcaattcttcaatacatataaaccaaaccctgaaacacagatcaaactaacatttgatacaacctct
>At3g02620-ORF
ATGGCTCTGCTCTTGAACTCGACGATGACTGTGGCTATGAAGCAGAATCCCGCGACCGCGGTATCTTTTATGCAGACTACTTGTTTGGGATCTAGTTTTTCTCCTCCTCGTCATCTTCAAGTTTCCAAGACGTTTCGACCCATCAAAGAAGTATCAAACCAAGTGACACACACAATAACACAAGAGAAACTGGAGATCTTCAAATCAATGGAGAATTGGGCCCAAGAAAACTTATTATCTTACCTCAAACCCGTCGAAACTTCATGGCAACCACAAGACTTTTTGCCAGAAACCAAAGACGAAGACCGATTCTACGAACAAGTGAAAGAGCTAAGAGATCGAACAAAAGAGATCCCTGACGATTACTTTGTAGTTCTTGTCGGAGATATGATCACCGAAGAAGCATTACCGACTTATCAAACGGTTATGAACACTCTCGACGGAGCCAAAGACGAGACCGGTGTTAGTCTAACACCGTGGGCGGTTTGGCTTAGAGCATGGACGGCGGAGGAAAATCGACACGGTGATTTGTTGAATAAGTACCTTTACTTATCAGGTCGTGTTGATACGCGACATGTTGAAAAGACTATTCAATATCTTATCGGATCCGGCATGGACACCAAATATGAGAACAATCCCTACAACGGCTACATCTACACTTCTTTTCAAGAGAGAGCAACTTTTATCTCCCACGCCAACACGGCGAAGCTAGCCACGACATACGGCGACACAACTCTCGCCAAAATCTGTGGAACAATCGCGGCGGATGAGAAGCGGCACGAGATGGCGTATACGCGGATCGTCGAGAAGCTATTCGAGATTGATCCCGATGGTACCGTACAAGCTCTAGCGAGTATGATGAGGAAGCGAATCACGATGCCGGCTCAGCTGATGCACGACGGTCGCGATGACAATCTGTTCGATCATTACGCTGCTGTGGCGCAGAGAATCGGAGTGTATACCGCGACGGATTACGCAGGGATTTTGGAGTTTTTGTTGCGGCGGTGGGAGGTGGAGAAGTTAGGGATGGGTTTGTCCGGTGAAGGAAGGAGAGCACAGGATTATCTGTGTACCTTGCCGCAGAGGATCAGGAGGTTAGAGGAAAGAGCTGACGATAGAGTCAAACGTGCGTCAAAGTCTAAACCTTCTGTTTCGTTCAGCTGGATTTACGGGAGAGAAGTTGAACTCTAAATGGCGATGGCTATGGATCGGATCGTCTTCTCCCCTTCATCTTACGTCTATCGTCCTTGTCAAGCTAGGGGATCCAGATCTTCCAGAGTTTCCATGGCTTCTACGATTCGCTCTGCGACTACAGAGGTTACGAATGGAAGGAAACTGTATATCCCTCCCAGAGAGGTGCATGTCCAAGTCAAACATTCAATGCCGCCACAAAAGTTAGAGATCTTTAAGTCTTTAGAAGGATGGGCTGATGAAACCCTGTTGACTTATTTAAAACCTGTTGAGAAATCGTGGCAGCCTACCGATTTTCTTCCCGAACCTGAGTCGGAAGGATTCTATGACCAAGTCAAGGAGCTAAGGGAAAGGTGCAAGGAACTTCCTGATGACTATTTTGTGGTGCTTGTTGGGGATATGATCACTGAAGAAGCACTTCCTACTTACCAGACCATGTTGAACACATTGGATGGTGTTAGGGATGAGACAGGAGCTAGTCCTACTCCTTGGGCTATATGGACCAGGGCTTGGACTGCTGAGGAGAATAGACATGGGGATCTCCTTAACAAGTATCTTTATCTGTCTGGTCGGGTAGACATGAGGCAGATTGAAAAGACTATTCAGTACCTGATTGGTTCTGGAATGGATCCAAAAACTGAAAACAACCCTTACTTGGGTTTCATCTACACATCATTTCAAGAAAGAGCGACCTTCATCTCCCATGGAAACACTGCCAGACTGGCGAAAGATCGTGGAGATTTGAAACTTGCGCAGATATGCGGGACCATTGCTGCTGATGAGAGGCGTCATGAGACTGCTTACACCAAGATTGTAGAGAAGCTCTTTGAAATTGACCCTGATGGCACGATCTTGGGCCTGGCTGATATGATGAAGAAAAAGATATCAATGCCTGCACATTTAATGTATGATGGCCAAGATGATAACCTGTTTGAGCACTTCTCAACCGTTGCCCAGAGGCTCGGTGTCTACACTGCCAAGGACTATGCTGATATTCTGGAGTTTCTTGTTGAACGGTGGAATGTGGAGACTTTGACAGACCTTTCTAGTGAAGGACACAGGGCCCAGGACTTTGTCTGCGGACTACCTGCAAGAATCCGTAAAATTGAAGAGAGAGCTCAAGGAAGAGCCAAAGAAGCTGCCAAAAACATACCATTCAGCTGGATATTTGGTCGAAATATCAGGGCTTAA
Right click here to download alligned
nucleotide
or
protein
sequences.
Protein 3 -stearoyl acyl carrier protein desaturase, putative
Camelina Protein Sequences
>contig06801 length=1076 numreads=72
GSLANKNTSNQSLEVLSPLPYKMHTHKSLLSNTSQWAALVPSPSTFLASRSHRPVKISAVATPVRPALKHENKIHSMAPEKVEIFKSLDGWATDQILPLLKPVDQCWQPASFLPDPALPFSEFTDQVRELRQRTASLPDEYFVVLVGDMITEDALPTYQTMINTLDGVRDETGASSSAWARWTRAWTAEENRHGDLLRTYLYLSGRVDMLMVERTVQYLIGSGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKAAGDPVLARICGTIAADEKRHERAYASIVEKLLEIDPNGAVSAIADMMRKKITMPAHLMTDGRDPMLFEHFSAVAQRLGVYTADDYADILEFLVGRWRLE
Camelina Nucleotide Sequence
>contig06801 length=1076 numreads=72
GGATCACTCGCaAACaAAAATACCTCCAACCAAAGTTTAGAAGTCTTGTCtCCTTTACCATACaAAATGCATACCCACAAGTCTCTTCTCTCCAACACCTCCCAATGGGCTGCACTAGTGCCTTCTCCGTCCACCTTTCTCGCCTCTCGCTCCCACCGGCCGGTCAAGATCTCCGCCGTGGCAACCCCGGTGAGGCCGGCTCTAAAACACGAAAACAAAATCCACTCTATGGCACCGGAGAAAGTGGAGATATTCAAATCTTTAGACGGATGGGCCACTGATCAAATCTTGCCTCTTCTCAAACCCGTTGACCAATGTTGGCAACCCGCTTCTTTCTTACCCGACCCGGCCTTACCCTTCTCCGAGTTCACCGATCAGGTGCGTGAACTGAGGCAAAGAACAGCGTCATTGCCGGACGAGTACTTCGTGGTGTTGGTCGGAGATATGATAACGGAGGACGCGTTGCCGACTTACCAGACGATGATCAACACGCTTGATGGCGTTAGAGACGAGACTGGTGCGAGTAGTAGCGCGTGGGCAAGGTGGACACGTGCGTGGACGGCTGAGGAGAACCGTCATGGTGATTTGTTGCGGACTTACTTGTATTTATCCGGTCGGGTTGATATGCTTATGGTCGAACGCACCGTGCAGTATCTCATCGGCTCAGGCATGGATCCAGGAACAGAGAACAACCCGTACCTTGGTTTCGTGTACACGTCGTTCCAAGAGCGAGCCACCTTCGTTTCTCACGGCAACACCGCACGGCTGGCTAAGGCTGCCGGAGATCCTGTCCTCGCTCGAATCTGCGGAACCATTGCAGCGGACGAGAAGCGCCACGAGAGAGCCTACGCGAGCATCGTTGAGAAGCTCCTCGAGATCGACCCAAACGGTGCAGTCTCTGCCATCGCCGACATGATGCGGAAGAAGATCACAATGCCGGCTCATCTAATGACAGATGGTCGAGACCCGATGCTCTTCGAACATTTCTCCGCCGTGGCTCAACGGCTAGGGGTTTACACGGCGGATGATTACGCGGATATCTTGGAGtTTTTGGtTGGACGGTGGAGACTGGAGAA
Arabidopsis Orthologous Sequences
>gi|21537299|gb|AAM61640.1| stearoyl acyl carrier protein desaturase, putative [Arabidopsis thaliana]
MLTHKSLLSPTTQWATLMPSPSTFLASRPRGPAKISAVAAPVRPALKHQNKIHTMPPEKMEIFKSLDGWATDQILPLLKPVDQCWQPASFLPDPALPFSEFTDQVRELRERMASLPDEYFVVLVGDMITEDALPTYQTMINTLDGVRDETGASESAWASWTRAWTAEENRHGDLLRTYLYLSGRVDMLMVERTVQHLIGSGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKSAGDPVLARICGTIAADEKRHENAYVRIVEKLLEIDPNGAVSAVADMMRKKITMPAHLMTDGRDPMLFEHFSAVAQRLEVYTADDYADILEFLVGRWRLEKLEGLTGEGQRAQEFVCGLAQRIRRLQERADERAKKLKKTHEVCFSWIFDKQISV
Matching Arabidopsis Sequences from
Arabidopsis Lipid Metabolism Website
(Open Reading Frame and Gene)
>At1g43800-Gene
caaccataagatccaatggctcgttgaatacgtagttacgtacaactggcattctcgtgtacaaagtcactaaaacaaaaacaaaatccattatagatattaaaacgactaaatttaattatagcaataacaattgaacagcaagatcacaaatttagaattcaagagcttaaaaaattcattaaaagtagaaaaatacaaaaataatacattaaaattcaaagttcatataattggaagtaaaaagaaatttttttatcactctcaagttttgtcttaaatgggacaaatttaactttttaaacaaaacccacagaatctcaaaccagttagcaccccttgtttcaccccacggtttgtttaacgaacaacagccaaccaccaaattactattataccctcatcaccatttgactatttattagtccacactctatagtagttgttacattcaaagaactccaaagtaaattaaagtcttctctacttcaccataaaaaATGCTTGCGCACAAGTCTCTTCTCTCCTTTACCACCCAATGGGCTACACTAATGCCATCTCCGTCTACTTTTCTCGCCTCTCGCCCCCGTGGACCGGCCAAGATCTCGGCCGTGGCAGCACCAGTGAGGCCGGCTCTAAAACACCAAAACAAAATCCACACCATGCCACCGGAGAAAATGGAGATATTCAAATCTTTAGATGGATGGGCCAAGGATCAAATCTTGCCTCTTCTCAAACCCGTTGACCAATGTTGGCAACCCGCTTCTTTCTTACCCGACCCGGCCTTACCCTTCTCCGAGTTTACCGACCAGgtacgttatatacatcatgaatcttgttattctcttatttatgaagaagtagaagttattacaaagtttataactttgtcatgaaatgtataaaccagaatacctatactatataatatgcacattaaaccaagactaaccaataaatgaaaagatgttaaaatgtgtatttataatgatagGTTCGTGAGCTGAGGGAAAGAACGGCCTCGCTGCCAGACGAATACTTCGTGGTGTTGGTTGGAGATATGATAACGGAGGACGCGTTGCCTACTTACCAGACGATGATCAACACCCTTGATGGCGTAAGGGACGAGACTGGTGCGAGTGAGAGCGCGTGGGCAAGTTGGACACGAGCGTGGACGGCTGAGGAGAACCGTCATGGTGATTTGTTGCGGACTTACTTGTACTTATCCGGTCGTGTTGATATGCTTATGGTTGAACGCACCGTTCAGCATCTCATCGGCTCGGGCATGgtcagttctctttctatacctttatgtcatgatgtaaaaatgcttatactagtttcattagtttagtagttttctgatttatttatttgtttgtgtcattttaatttttttttatttggtttggttaagttattttttttgttatgcatgtgtggaaacgtaaacataaccaaaactatttgccattttgtttgttttgatctggtatgataaaattttaatttggtttttggtttgaatacattttggacgatttaaaaagaaaaaaaaatccaccttttaataataataaaaattaataatatattatgtaagatatatagaaaataaattctgatttttttgtttgtttagttcgcttacaataacataagctttgggtttaaatgtttttaaataatagaacgaattgatcacaaacaatttcaatctaagtattttagtagtttacgtttggttggtccggattaggtttggttggttcgggttaggtttataccattcataacttttcatattggcaacttcagGATCCAGGAACTGAGAACAATCCATACTTAGGTTTCGTGTACACGTCATTCCAAGAGCGAGCCACATTTGTGTCTCACGGCAACACGGCAAGGCTAGCCAAGTCCGCAGGAGATCCTGTCCTCGCTCGCATCTGCGGAACCATTGCAGCTGACGAGAAGCGCCATGAAAACGCTTACGTACGCATCGTTGAGAAGCTCCTCGAGATCGACCCTAACGGTGCAGTCTCAGCCGTGGCCGACATGATGCGGAAGAAGATCACAATGCCGGCTCATCTAATGACAGACGGTCGAGACCCGATGCTATTCGAACATTTCTCCGCCGTGGCTCAGCGGCTAGAGGTTTACACGGCGGATGATTACGCTGACATCTTGGAGTTTTTGGTTGGACGGTGGAGATTGGAGAAGCTAGAAGGATTGACGGGTGAGGGCCAACGTGCACAGGAGTTTGTGTGTGGGTTAGCTCAGAGGATTAGACGCCTTCAAGAGCGTGCAGACGAGAGAGCTAAGAAGCTTAAGAAGACCCATGAGGTTTGCTTTAGTTGGATCTTCGATAAGCAGATTAGTGTGTAAactcttgaaaatatcaaacttttcctttctccgtttcttgtttttttttttcttttttgtaatgcaaatctttgttcttaggaaaatttaatgttaagtttctatctatgtaacgtgtttttaacttaaaatttgtataatttaaacatggctcaaacggataatttttttttttgttaacttagagtaaatccttgaacctatggactaattccagaggagagggtatcctatgggtaaggtctccccatgttttcaaataggccttaagcaataggtccattcccatgtgccaaagggacatggctaagcaattgtgcatctgaggagaattgatacctagcctagaccaaacaagacaactcttccaccagactagaaccactagcccaccacctctggttaaactgataaattaactaagtttttgttgaccaatccggacaatccgatttgacccgatccaaaccaaaacgaaaataattgatttag
>At1g43800-ORF
ATGCTTGCGCACAAGTCTCTTCTCTCCTTTACCACCCAATGGGCTACACTAATGCCATCTCCGTCTACTTTTCTCGCCTCTCGCCCCCGTGGACCGGCCAAGATCTCGGCCGTGGCAGCACCAGTGAGGCCGGCTCTAAAACACCAAAACAAAATCCACACCATGCCACCGGAGAAAATGGAGATATTCAAATCTTTAGATGGATGGGCCAAGGATCAAATCTTGCCTCTTCTCAAACCCGTTGACCAATGTTGGCAACCCGCTTCTTTCTTACCCGACCCGGCCTTACCCTTCTCCGAGTTTACCGACCAGGTTCGTGAGCTGAGGGAAAGAACGGCCTCGCTGCCAGACGAATACTTCGTGGTGTTGGTTGGAGATATGATAACGGAGGACGCGTTGCCTACTTACCAGACGATGATCAACACCCTTGATGGCGTAAGGGACGAGACTGGTGCGAGTGAGAGCGCGTGGGCAAGTTGGACACGAGCGTGGACGGCTGAGGAGAACCGTCATGGTGATTTGTTGCGGACTTACTTGTACTTATCCGGTCGTGTTGATATGCTTATGGTTGAACGCACCGTTCAGCATCTCATCGGCTCGGGCATGGATCCAGGAACTGAGAACAATCCATACTTAGGTTTCGTGTACACGTCATTCCAAGAGCGAGCCACATTTGTGTCTCACGGCAACACGGCAAGGCTAGCCAAGTCCGCAGGAGATCCTGTCCTCGCTCGCATCTGCGGAACCATTGCAGCTGACGAGAAGCGCCATGAAAACGCTTACGTACGCATCGTTGAGAAGCTCCTCGAGATCGACCCTAACGGTGCAGTCTCAGCCGTGGCCGACATGATGCGGAAGAAGATCACAATGCCGGCTCATCTAATGACAGACGGTCGAGACCCGATGCTATTCGAACATTTCTCCGCCGTGGCTCAGCGGCTAGAGGTTTACACGGCGGATGATTACGCTGACATCTTGGAGTTTTTGGTTGGACGGTGGAGATTGGAGAAGCTAGAAGGATTGACGGGTGAGGGCCAACGTGCACAGGAGTTTGTGTGTGGGTTAGCTCAGAGGATTAGACGCCTTCAAGAGCGTGCAGACGAGAGAGCTAAGAAGCTTAAGAAGACCCATGAGGTTTGC
Right click here to download alligned
nucleotide
or
protein
sequences.
Protein 4 - putative stearoyl-acyl carrier protein desaturase
Camelina Protein Sequences
>contig02231 length=1142 numreads=34
EEAQGKEEKREKMTMALLLNSTMTMARTKQTPAVAVSSPPPTCLGSSFSRRRPLRVSCVATNPRETSKETNKKTFRPIKEVPNQVTHTITQEKLEIFKSMEPWAQENLLPYLKPVETSWQPQDFLPETNDEDRFYEQVKELRDRTREIPDDYFVVLVGDMITEEALPTYQTTLNTLDGVKDETGGSLTPWAVWVRAWTAEENRHGDLLNKYLYLSGRVDMRHVERTIQYLIGSGMDSKFENNPYNGFIYTSFQERATFISHGNTARLATTYGDTTLAKICGTIAADEKRHETAYTRIVEKLFEIDPDGTVQALASMMRKRITMPAHLMHDGRDEDLFDHYAAVAQRIGGLYRDGLRWDFGVFVAAVGGGEVRVGFVR*RK
Camelina Nucleotide Sequence
>contig02231 length=1142 numreads=34
gGAAGAAGCACAAGGGAAAGAAGAAAAGAGAGAGAAAATGACGATGGCTTTGCTCTTGAACTCGACGATGACGATGGCTAGGACGAAGCAGACTCCAGCGGTGGCGGTATCTTCTCCAcCCCCTACTTGCTTGGGATCTAGTTTTTCACGTCGTCGTCCTCTTCGAGTTTCGTGTGTTGCCACAAACCCTAGAGAAACGAGTAAAGAAACAAACAAGAAGACGTTTCGACCCATCAAAGAAGTACCAAACCAAGTGACACACACAATCACACAAGAGAAGCTCGAGATCTTCAAATCAATGGAACCTTGGGCCCAAGAAAACTTATTACCTTACCTCAAACCCGTTGAAACTTCATGGCAACCACAAGACTTCTTGCCCGAAACCAACGACGAAGACCGGTTCTACGAGCAAGTAAAAGAGCTAAGAGATCGAACGAGAGAGATCCCTGACGATTACTTTGTAGTTCTTGTCGGAGACATGATCACCGAAGAAGCGTTACCAACTTATCAAACAACTTTAAACACTCTCGACGGCGTCAAGGACGAGACCGGCGGGAGTCTAACACCGTGGGCGGTTTGGGTTAGAGCATGGACGGCAGAGGAGAACCGACACGGTGATTTGTTGAATAAGTATCTTTACTTATCAGGTCGTGTTGACATGCGACATGTTGAAAGAACTATTCAATATCTTATCGGATCCGGCATGGACTCCAAATTTGAGAACAATCCCTACAATGGCTTCATCTACACTTCGTTTCaAgAGAGAGCCACGTTCATCTCCCACGGCAACACGGCGAGGCTAGCCACGACCTACGGCGAcACAACCCTCGCCAAAATCTGCGGAACAATCGCGGCGGACGAGAAACGGCACGAGACGGCTTACACAAGGATCGTCGAGAAGCTATTCGAGATAGATCCCGACGGAACCGTACAGGCTCTAGCGAGTATGATGAGGAAGCGGATCACGATGCCGGCTCATCTGATGCACGACGGACGCGACGAAGATCTGTTCGATCATTACGCCGcCGTgGCgCaGAGGAtCgGGGGTTTAtACCGCGACGGATTACGCtGGGATTTTGGAgTTTTTGtTGCGGCGGTGGGAGGTGGAGAAGTTAGGGtCGGGTTTGtCCGGTGAAGGaAGG
Arabidopsis Orthologous Sequences
>gi|79387246|ref|NP_186910.2| acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding [Arabidopsis thaliana]
MKMALLLNSTITVAMKQNPLVAVSFPRTTCLGSSFSPPRLLRVSCVATNPSKTSEETDKKKFRPIKEVPNQVTHTITQEKLEIFKSMENWAQENLLSYLKPVEASWQPQDFLPETNDEDRFYEQVKELRDRTKEIPDDYFVVLVGDMITEEALPTYQTTLNTLDGVKDETGGSLTPWAVWVRAWTAEENRHGDLLNKYLYLSGRVDMRHVEKTIQYLIGSGMDSKFENNPYNGFIYTSFQERATFISHGNTAKLATTYGDTTLAKICGTIAADEKRHETAYTRIVEKLFEIDPDGTVQALASMMRKRITMPAHLMHDGRDDDLFDHYAAVAQRIGVYTATDYAGILEFLLRRWEVEKLGMGLSGEGRRAQDYLCTLPQRIRRLEERANDRVKLASKSKPSVSFSWIYGREVEL
Matching Arabidopsis Sequences from
Arabidopsis Lipid Metabolism Website
(Open Reading Frame and Gene)
>At3g02610-Gene
tgatcaagccgatttgttttttacaaacggcatgcgttaccaaactttattatgtaccaaaaacgatccgttaagaatataaaaacctaaacataccatccttgtgatgttttgtttattgtaaaaccaaacaaatgtgttttcatgtgaattatgtacatttaaaattataacaaaatttatgatcttttgtatgtataacatgaaatatttgaacgccaatgcaaacggaaagaaattatattatttgcgttgagatttatgtctttgcgattacgtttaatagatctttaagactaactaacccaaattaatataagtaataaggactcgtcatatatatttatcatataagaataataataaattataagagctggctagggggtgacatgtttaacactccatcttttgtcaactcactatatactcctctctcctcctaacacagaggcacaagggcaagaagaaaagagagagatagagatatataaatgaagATGGCTCTTCTCTTGAACTCGACGATAACGGTGGCTATGAAGCAGAATCCGCTGGTCGCGGTATCTTTTCCGCGGACTACTTGCTTGGGATCTAGTTTTTCTCCTCCTCGTCTTCTTCGAGTTTCGTGTGTTGCCACAAACCCTAGgtgagttttatctttttagatcttcaattcgtttccttgatcaagttttttctttttcttttttctttttttcatttggctttatactggttaatttcgttgtatatgtttaactcattggttatatttaactatttgtctaattggcaaatcctttcaaaaccaaatcgaaacggtacaaaactgatcaaaaagttagtaatttttttccatatagaaaaatggcactgaatagtgaaagtgaacaacattgaacttagaaatacttcaaattaatctatagaattgattgtgttataagaaaatcctacaatcatttgcactcaaacggaaaaatcgcatgaagtcaggtaaactcattgggttttaaatacttgcatattaacttatgttatactattacaataagacacgaacctgatatgaaaataacaattttcttacaatgaaaatgttatagCAAGACGAGTGAAGAAACAGACAAGAAAAAGTTTCGACCCATCAAAGAAGTACCAAACCAAGTGACCCACACAATAACACAAGAGAAACTGGAGATCTTCAAATCAATGGAGAATTGGGCCCAAGAAAACTTATTATCTTACCTCAAACCCGTCGAAGCTTCCTGGCAACCACAAGACTTTTTGCCGGAAACCAACGACGAAGACCGATTCTACGAACAAGTAAAAGAGCTAAGAGATCGAACAAAAGAGATCCCTGACGATTACTTTGTAGTTCTTGTCGGAGATATGATCACCGAAGAAGCTTTACCAACTTATCAAACTACTTTGAACACTCTCGACGGCGTAAAAGACGAGACCGGTGGTAGTCTAACGCCGTGGGCGGTTTGGGTTCGAGCATGGACGGCGGAGGAAAATCGACACGGTGATTTGTTGAATAAGTATCTTTACTTATCAGGTCGTGTTGACATGCGACATGTTGAAAAGACTATTCAATATCTTATCGGATCCGGCATGgtacgttgcactcccataaatatatgtacgcttaaaatgtaaattataatttcttgaggatcaaattgataatgtttataattatttttcagGACTCCAAATTTGAGAACAATCCCTATAATGGCTTCATCTATACTTCTTTTCAAGAGAGAGCCACTTTCATCTCCCATGGCAACACGGCGAAGCTAGCCACAACCTACGGCGACACAACTCTCGCCAAAATCTGCGGAACAATCGCGGCGGATGAGAAGCGGCATGAGACGGCGTATACACGGATCGTCGAGAAGCTTTTCGAGATCGATCCCGATGGTACCGTACAAGCTCTAGCGAGTATGATGAGGAAGCGAATCACGATGCCGGCTCATCTGATGCACGACGGTCGCGACGACGATCTGTTCGATCATTACGCTGCGGTGGCGCAGAGAATCGGAGTTTATACCGCGACGGATTACGCAGGGATTTTGGAGTTTTTGTTGCGGCGGTGGGAGGTGGAGAAGTTAGGGATGGGTTTGTCCGGCGAAGGAAGGAGAGCACAGGATTATCTGTGTACCTTGCCGCAGAGGATCAGGAGGTTAGAGGAAAGAGCTAACGATAGAGTCAAACTTGCGTCAAAGTCAAAACCTTCTGTTTCCTTCAGCTGGATTTATGGGAGAGAAGTTGAACTATAAaacgacacatgttgttgtgttctgtactagactctaaaaggttaatgcgagcttatgggccttagagcatgtccattgcagggaccttacaagttttttaagagaattctaatggaaagaagcaaaaaaaaaaaaaaaaattgtctaattaaccaaggtgcgaaccttgaataaggtatttttgggtgagtaaggttcgctgacgtggcactatatcattggaggaccaataaaacaaaacaagttttttttcttttttctttctctcctctctcttggtttcgtatagagtttctaggctttggtttatgttcaaatttgtgtttgatctgttggtttttaagataaaaatgtgaccattttgctgcttattcacttctcattagcattacaacggattggtgacacaaaataattggttctaggtttatgtttatgctcttttgtttgctcatttagttgatgttatcaa
>At3g02610-ORF
ATGGCTCTTCTCTTGAACTCGACGATAACGGTGGCTATGAAGCAGAATCCGCTGGTCGCGGTATCTTTTCCGCGGACTACTTGCTTGGGATCTAGTTTTTCTCCTCCTCGTCTTCTTCGAGTTTCGTGTGTTGCCACAAACCCTAGCAAGACGAGTGAAGAAACAGACAAGAAAAAGTTTCGACCCATCAAAGAAGTACCAAACCAAGTGACCCACACAATAACACAAGAGAAACTGGAGATCTTCAAATCAATGGAGAATTGGGCCCAAGAAAACTTATTATCTTACCTCAAACCCGTCGAAGCTTCCTGGCAACCACAAGACTTTTTGCCGGAAACCAACGACGAAGACCGATTCTACGAACAAGTAAAAGAGCTAAGAGATCGAACAAAAGAGATCCCTGACGATTACTTTGTAGTTCTTGTCGGAGATATGATCACCGAAGAAGCTTTACCAACTTATCAAACTACTTTGAACACTCTCGACGGCGTAAAAGACGAGACCGGTGGTAGTCTAACGCCGTGGGCGGTTTGGGTTCGAGCATGGACGGCGGAGGAAAATCGACACGGTGATTTGTTGAATAAGTATCTTTACTTATCAGGTCGTGTTGACATGCGACATGTTGAAAAGACTATTCAATATCTTATCGGATCCGGCATGGACTCCAAATTTGAGAACAATCCCTATAATGGCTTCATCTATACTTCTTTTCAAGAGAGAGCCACTTTCATCTCCCATGGCAACACGGCGAAGCTAGCCACAACCTACGGCGACACAACTCTCGCCAAAATCTGCGGAACAATCGCGGCGGATGAGAAGCGGCATGAGACGGCGTATACACGGATCGTCGAGAAGCTTTTCGAGATCGATCCCGATGGTACCGTACAAGCTCTAGCGAGTATGATGAGGAAGCGAATCACGATGCCGGCTCATCTGATGCACGACGGTCGCGACGACGATCTGTTCGATCATTACGCTGCGGTGGCGCAGAGAATCGGAGTTTATACCGCGACGGATTACGCAGGGATTTTGGAGTTTTTGTTGCGGCGGTGGGAGGTGGAGAAGTTAGGGATGGGTTTGTCCGGCGAAGGAAGGAGAGCACAGGATTATCTGTGTACCTTGCCGCAGAGGATCAGGAGGTTAGAGGAAAGAGCTAACGATAGAGTCAAACTTGCGTCAAAGTCAAAACCTTCTGTTTCC
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last updated by Jason Macrander 6/9/2010